RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CSH2P0DML3 217 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SMIM10L1P0DMW3 83 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHV3-43DP0DP04 118 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CTRB1P17538 263 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ERCC2P18074 760 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 PRPS1L1P21108 318 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TNFSF4P23510 183 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 PAX7P23759 505 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CMA1P23946 247 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 DNAJB1P25685 340 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 MAPK3P27361 379 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 GCAP28676 217 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CD40LGP29965 261 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 NMT1P30419 496 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 FMO3P31513 532 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 EPHX2P34913 555 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SAA4P35542 130 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SOAT1P35610 550 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ADD2P35612 726 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 PSMC2P35998 433 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 PGM1P36871 562 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 VDAC2P45880 294 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 MTIF2P46199 727 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 GABRA4P48169 554 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 HARS2P49590 506 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CAMPP49913 170 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 RPS15P62841 145 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 RPP38P78345 283 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TGFBR3Q03167 851 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CHRNB3Q05901 458 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SULT2A1Q06520 285 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 IL10RBQ08334 325 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CCDC173Q0VFZ6 552 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 HSPB3Q12988 150 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TSPAN31Q12999 210 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 BTN1A1Q13410 526 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 EIF2B1Q14232 305 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 KIAA0087Q14695 138 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 STARD3Q14849 445 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ELOCQ15369 112 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 P2RY14Q15391 338 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CYTH1Q15438 398 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 GPR68Q15743 365 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ZBTB6Q15916 424 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SNAPC1Q16533 368 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 DPYSL2Q16555 572 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SGCAQ16586 387 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ZSCAN26Q16670 478 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 NDUFA9Q16795 377 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 NDUFAF6Q330K2 333 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ACSF3Q4G176 576 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 PYCR3Q53H96 274 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SPIN4Q56A73 249 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 C1orf141Q5JVX7 400 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 FAM209BQ5JX69 171 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 WDR45BQ5MNZ6 344 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 BEND6Q5SZJ8 279 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 RNASEH2BQ5TBB1 312 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 LYPLAL1Q5VWZ2 237 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 IL31Q6EBC2 164 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 DHRS7BQ6IAN0 325 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 GLYATQ6IB77 296 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TANGO2Q6ICL3 276 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CAPN13Q6MZZ7 669 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 NAA16Q6N069 864 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CXorf57Q6NSI4 855 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 DNAJC24Q6P3W2 148 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 FAM199XQ6PEV8 388 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM270Q6UE05 265 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CES3Q6UWW8 571 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 FAM131AQ6UXB0 335 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TMIGD1Q6UXZ0 262 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 NCCRP1Q6ZVX7 275 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 OTUD6AQ7L8S5 288 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CHST3Q7LGC8 479 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 NLRP9Q7RTR0 991 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC16A14Q7RTX9 510 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 GPR141Q7Z602 305 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 COMTD1Q86VU5 262 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 AMZ2Q86W34 360 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 C17orf64Q86WR6 236 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SIAH3Q8IW03 269 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 WDFY1Q8IWB7 410 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 PEX5LQ8IYB4 626 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CPNE9Q8IYJ1 553 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ATOH7Q8N100 152 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SIX6OS1Q8N1H7 587 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 STK40Q8N2I9 435 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 LINC00471Q8N535 108 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 LINC00469Q8N7U9 141 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 NAXEQ8NCW5 288 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 PXT1Q8NFP0 134 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TTLQ8NG68 377 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 OR5T1Q8NG75 326 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 OR51T1Q8NGJ9 327 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 OR4C16Q8NGL9 310 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 OR1N2Q8NGR9 330 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 OR2G3Q8NGZ4 309 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 OR9G1Q8NH87 305 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SETD6Q8TBK2 473 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms