RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 CRIPAKQ8N1N5 446 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 TSLPQ969D9 159 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 ZNF559Q9BR84 538 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 DKKL1Q9UK85 242 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 DAPP1Q9UN19 280 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 SPARCP09486 303 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 NPR2P20594 1047 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 C3orf38Q5JPI3 329 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 BBS1Q8NFJ9 593 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 ELF4Q99607 663 aaPredicted RBP17.4■□□□□ 0.38
CSPG5-202ENST00000383738 NUDT22Q9BRQ3 303 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 SCP2D1Q9UJQ7 156 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 ARHGEF17Q96PE2 2063 aaPredicted RBP17.4■□□□□ 0.38
CSPG5-202ENST00000383738 GABRB1P18505 474 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 HLA-DMAP28067 261 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 CD1CP29017 333 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 HCCSP53701 268 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 TMEM44Q2T9K0 475 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 SLC22A10Q63ZE4 541 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 VASNQ6EMK4 673 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 SFXN4Q6P4A7 337 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 SDR9C7Q8NEX9 313 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 DUSP19Q8WTR2 217 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.4■□□□□ 0.38
CSPG5-202ENST00000383738 GABARAPL3Q9BY60 117 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 SEMA4CQ9C0C4 833 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
CSPG5-202ENST00000383738 NFYAP23511 347 aaPredicted RBP17.4■□□□□ 0.38
CSPG5-202ENST00000383738 LSM11P83369 360 aaKnown RBP eCLIP17.4■□□□□ 0.38
CSPG5-202ENST00000383738 AANATQ16613 207 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 ENTPD8Q5MY95 495 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 MSANTD1Q6ZTZ1 278 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 OR6M1Q8NGM8 313 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 TMEM163Q8TC26 289 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 WDR77Q9BQA1 342 aaPredicted RBP17.4■□□□□ 0.38
CSPG5-202ENST00000383738 DUSP23Q9BVJ7 150 aa17.4■□□□□ 0.38
CSPG5-202ENST00000383738 GXYLT2A0PJZ3 443 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 SIGLEC6O43699 453 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 ZNF14P17017 642 aaPredicted RBP17.39■□□□□ 0.37
CSPG5-202ENST00000383738 EVX1P49640 407 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 MAP2K6P52564 334 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 PER3P56645 1201 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 FOXL2P58012 376 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 Q5BKY6 102 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 FAM76BQ5HYJ3 339 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 ZER1Q7Z7L7 766 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 TMEM17Q86X19 198 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 GHSRQ92847 366 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 OR2M2Q96R28 347 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 PITX2Q99697 317 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 ACTR6Q9GZN1 396 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 EPHA6Q9UF33 1036 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 MDC1Q14676 2089 aaKnown RBP17.39■□□□□ 0.37
CSPG5-202ENST00000383738 TRPM7Q96QT4 1865 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 TRBV11-1A0A0K0K1C0 115 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 TRAPPC13A5PLN9 417 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 ZAR1LA6NP61 321 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 LEUTXA8MZ59 168 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 CXCL3P19876 107 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 SLC6A6P31641 620 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 CASRP41180 1078 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 CTXN1P60606 82 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 SERTAD2Q14140 314 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 DUSP5Q16690 384 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 TCTN3Q6NUS6 607 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 AGBL5Q8NDL9 886 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 NAT6Q93015 286 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 ATG5Q9H1Y0 275 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 ZMAT3Q9HA38 289 aaKnown RBP17.39■□□□□ 0.37
CSPG5-202ENST00000383738 TLCD2A6NGC4 264 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 UNC119BA6NIH7 251 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 PLA2G10O15496 165 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 PGAM2P15259 253 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 TRIM23P36406 574 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 ETV6P41212 452 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 AIMP2Q13155 320 aaKnown RBP17.39■□□□□ 0.37
CSPG5-202ENST00000383738 OR10K1Q8NGX5 313 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 FBXW5Q969U6 566 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 CNRIP1Q96F85 164 aaPredicted RBP17.39■□□□□ 0.37
CSPG5-202ENST00000383738 C1QTNF3Q9BXJ4 246 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 FANCFQ9NPI8 374 aa17.39■□□□□ 0.37
CSPG5-202ENST00000383738 PATE3B3GLJ2 98 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 F13BP05160 661 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 MAP3K8P41279 467 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 CRYBB2P43320 205 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 KCNJ5P48544 419 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 RUNX2Q13950 521 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 FZD2Q14332 565 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 LIX1LQ8IVB5 337 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 KIAA1958Q8N8K9 716 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 THAP4Q8WY91 577 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 NSMAFQ92636 917 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 PLEKHA1Q9HB21 404 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 NDUFB11Q9NX14 153 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 AKAP6Q13023 2319 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 A0A1W2PS29 197 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 TCRBV16S1A1N1A0A5B0 115 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 TRABD2BA6NFA1 517 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 PAPLNO95428 1278 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 MSL3P1P0C860 447 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms