RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ACTG2P63267 376 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 OLFML2AQ68BL7 652 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 USP53Q70EK8 1073 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 RANBP3LQ86VV4 465 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-202ENST00000381990 ARL14Q8N4G2 192 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 BVESQ8NE79 360 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 OR52H1Q8NGJ2 320 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 ZNF671Q8TAW3 534 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 CLDN23Q96B33 292 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 SMIM19Q96E16 107 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 CCDC3Q9BQI4 270 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 ADGRL4Q9HBW9 690 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 SIDT1Q9NXL6 827 aaKnown RBP8.2□□□□□ -1.1
GPNMB-202ENST00000381990 NKIRAS2Q9NYR9 191 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 MED11Q9P086 117 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 NTMQ9P121 344 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 IL20RAQ9UHF4 553 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 RCE1Q9Y256 329 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 SLC35A3Q9Y2D2 325 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 SPACA6W5XKT8 324 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 SLC22A23A1A5C7 686 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 ZNF860A6NHJ4 632 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 LILRA5A6NI73 299 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 ZNF879B4DU55 563 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 OGG1O15527 345 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 PIP5K1CO60331 668 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 THY1P04216 161 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 ST6GAL1P15907 406 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 RAB3AP20336 220 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 SIM1P81133 766 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-202ENST00000381990 LTB4RQ15722 352 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 RNASE12Q5GAN4 147 aaKnown RBP8.2□□□□□ -1.1
GPNMB-202ENST00000381990 ZNF626Q68DY1 528 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 Q6ZTK2 550 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 SYS1Q8N2H4 156 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 SLC43A2Q8N370 569 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 C16orf58Q96GQ5 468 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 SPACA7Q96KW9 195 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 HSPA12BQ96MM6 686 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 ACTRT3Q9BYD9 372 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-202ENST00000381990 MTHFD2LQ9H903 347 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-202ENST00000381990 NRIP3Q9NQ35 241 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 SLC7A7Q9UM01 511 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 CLEC4AQ9UMR7 237 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 ABCA7Q8IZY2 2146 aa8.2□□□□□ -1.1
GPNMB-202ENST00000381990 CEP192Q8TEP8 1941 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 OR2M5A3KFT3 312 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 RIIAD1A6NNX1 92 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 GMDSO60547 372 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 DNAJB6O75190 326 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 KRT33AO76009 404 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 LDOC1O95751 146 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-202ENST00000381990 PPP3CBP16298 524 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 ZNF3P17036 446 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 PYCR1P32322 319 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 ACVR1BP36896 505 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 PSMA6P60900 246 aaKnown RBP8.19□□□□□ -1.1
GPNMB-202ENST00000381990 SEC61A1P61619 476 aaKnown RBP8.19□□□□□ -1.1
GPNMB-202ENST00000381990 HNRNPKP61978 463 aaKnown RBP eCLIP8.19□□□□□ -1.1
GPNMB-202ENST00000381990 FOXK2Q01167 660 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 ZNF85Q03923 595 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 HEPHL1Q6MZM0 1159 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 ZC3H14Q6PJT7 736 aaKnown RBP8.19□□□□□ -1.1
GPNMB-202ENST00000381990 LINGO2Q7L985 606 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 C19orf47Q8N9M1 422 aaKnown RBP8.19□□□□□ -1.1
GPNMB-202ENST00000381990 OR4D9Q8NGE8 314 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 FCAMRQ8WWV6 532 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 PMEPA1Q969W9 287 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 ZG16BQ96DA0 208 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 LRFN5Q96NI6 719 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 ZNF416Q9BWM5 594 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 CDCP1Q9H5V8 836 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 AUNIPQ9H7T9 357 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 NOX3Q9HBY0 568 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 FAM60AQ9NP50 221 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 IFT46Q9NQC8 304 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 ST6GALNAC2Q9UJ37 374 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 ZNF443Q9Y2A4 671 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-202ENST00000381990 HRH3Q9Y5N1 445 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 KCNE3Q9Y6H6 103 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 SPAG17Q6Q759 2223 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 TRAPPC13A5PLN9 417 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 CDHR4A6H8M9 788 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 PDCD5O14737 125 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 ARPC1BO15143 372 aaKnown RBP8.19□□□□□ -1.1
GPNMB-202ENST00000381990 AQP8O94778 261 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 NTN1O95631 604 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 PROS1P07225 676 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 THBS1P07996 1170 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 CPMP14384 443 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 SLC2A5P22732 501 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 DLX5P56178 289 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 OR12D2P58182 307 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 NXPH1P58417 271 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 ZP2Q05996 745 aa8.19□□□□□ -1.1
GPNMB-202ENST00000381990 HLXQ14774 488 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-202ENST00000381990 SFRP4Q6FHJ7 346 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-202ENST00000381990 SLC25A25Q6KCM7 469 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms