RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 EVA1AQ9H8M9 152 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 FER1L5A0AVI2 2057 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 TCRBV16S1A1N1A0A5B0 115 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 IRGMA1A4Y4 181 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 LRRN3E7EW58 273 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 OIP5O43482 229 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 NCR1O76036 304 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 HLA-DQB1P01920 261 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 IGKV3-11P04433 115 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 HPGDP15428 266 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 CXCL3P19876 107 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 HTR1FP30939 366 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 PPICP45877 212 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 CCR4P51679 360 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 GBX2P52951 348 aaPredicted RBP13.03□□□□□ -0.32
CLCN4-201ENST00000380829 FOXK2Q01167 660 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 KANSL1Q7Z3B3 1105 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 CMIPQ8IY22 773 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 ADOQ96SZ5 270 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 UQCC2Q9BRT2 126 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 VN1R1Q9GZP7 353 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 LRRN3Q9H3W5 708 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 SCPEP1Q9HB40 452 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 ENAMQ9NRM1 1142 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 SLCO1C1Q9NYB5 712 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 UBQLN2Q9UHD9 624 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 PILRBQ9UKJ0 227 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 TRAV6A0A075B6T7 132 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 LY6G6EA0A0G2JKS1 128 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 LINC01387J3KSC0 135 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 SIGLEC6O43699 453 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 PTP4A3O75365 173 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 PPP1R3DO95685 299 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 ACSM4P0C7M7 580 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 SLC1A3P43003 542 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 CBX5P45973 191 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 ELAVL1Q15717 326 aaKnown RBP13.03□□□□□ -0.32
CLCN4-201ENST00000380829 HLA-BQ31612 363 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 APOOLQ6UXV4 268 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 LINC00114Q6XXX2 140 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 LANCL3Q6ZV70 420 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 KMT5CQ86Y97 462 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 SIRT6Q8N6T7 355 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 ZFP41Q8N8Y5 198 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 OR51G2Q8NGK0 314 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 OR2I1PQ8NGU4 316 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 PHOSPHO1Q8TCT1 267 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 KATNB1Q9BVA0 655 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 MED28Q9H204 178 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 PPP1R3EQ9H7J1 279 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 EXOSC1Q9Y3B2 195 aaKnown RBP13.03□□□□□ -0.32
CLCN4-201ENST00000380829 U3KQA8 63 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 CFAP54Q96N23 3096 aa13.03□□□□□ -0.32
CLCN4-201ENST00000380829 A0A1B0GTQ1 180 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 TMEM129A0AVI4 362 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 EFCAB7A8K855 629 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 IL33O95760 270 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 IL1AP01583 271 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 RBM34P42696 430 aaKnown RBP13.02□□□□□ -0.32
CLCN4-201ENST00000380829 ZNF273Q14593 569 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 TUSC1Q2TAM9 212 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 RPL13AP3Q6NVV1 102 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 NIPAL3Q6P499 406 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 TMEM71Q6P5X7 295 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 CBLN3Q6UW01 205 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 C9orf40Q8IXQ3 194 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 GHDCQ8N2G8 530 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 LRRC17Q8N6Y2 441 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 SAP25Q8TEE9 199 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 ADIPOR1Q96A54 375 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 KIAA1143Q96AT1 154 aaPredicted RBP13.02□□□□□ -0.32
CLCN4-201ENST00000380829 LCORQ96JN0 433 aaPredicted RBP13.02□□□□□ -0.32
CLCN4-201ENST00000380829 SORCS2Q96PQ0 1159 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 SECISBP2Q96T21 854 aaKnown RBP13.02□□□□□ -0.32
CLCN4-201ENST00000380829 TMEM43Q9BTV4 400 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 UBQLN4Q9NRR5 601 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 NCOR1O75376 2440 aa13.02□□□□□ -0.32
CLCN4-201ENST00000380829 ADAMTS20P59510 1910 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 C2orf92A0A1B0GVN3 265 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 A0A1W2PQM1 296 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 GMFGO60234 142 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 UTS2O95399 124 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 CFIP05156 583 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 SLC16A1P53985 500 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 CCL7P80098 99 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 FHL1Q13642 323 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 NR0B2Q15466 257 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 TMEM44Q2T9K0 475 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 COL28A1Q2UY09 1125 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 ZNF791Q3KP31 576 aaPredicted RBP13.02□□□□□ -0.33
CLCN4-201ENST00000380829 LGALSLQ3ZCW2 172 aaPredicted RBP13.02□□□□□ -0.33
CLCN4-201ENST00000380829 GDPGP1Q6ZNW5 385 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 HDDC2Q7Z4H3 204 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 CYB561A3Q8NBI2 242 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 OR6M1Q8NGM8 313 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 OR4C6Q8NH72 309 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 C3orf49Q96BT1 292 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 DUSP23Q9BVJ7 150 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 CLEC4MQ9H2X3 399 aaPredicted RBP13.02□□□□□ -0.33
CLCN4-201ENST00000380829 CMC2Q9NRP2 79 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms