RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 MFRPQ9BY79 579 aa21■□□□□ 0.95
VPS16-201ENST00000380443 RTN4RQ9BZR6 473 aa21■□□□□ 0.95
VPS16-201ENST00000380443 SLC26A1Q9H2B4 701 aa21■□□□□ 0.95
VPS16-201ENST00000380443 R4GN57 208 aa21■□□□□ 0.95
VPS16-201ENST00000380443 CABIN1Q9Y6J0 2220 aa21■□□□□ 0.95
VPS16-201ENST00000380443 GPRIN2O60269 458 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 GATBO75879 557 aaKnown RBP20.99■□□□□ 0.95
VPS16-201ENST00000380443 IL7P13232 177 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 NBL1P41271 181 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 DUSP3P51452 185 aaPredicted RBP20.99■□□□□ 0.95
VPS16-201ENST00000380443 EMP2P54851 167 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 SUMO3P55854 103 aaPredicted RBP20.99■□□□□ 0.95
VPS16-201ENST00000380443 SIRPAP78324 504 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 RPL18Q07020 188 aaKnown RBP20.99■□□□□ 0.95
VPS16-201ENST00000380443 SLC6A19Q695T7 634 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 GDPD3Q7L5L3 318 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 SLC16A9Q7RTY1 509 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 PPP1R3BQ86XI6 285 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 LSM14AQ8ND56 463 aaKnown RBP20.99■□□□□ 0.95
VPS16-201ENST00000380443 GPR119Q8TDV5 335 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 HTRA1Q92743 480 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 CCDC74BQ96LY2 380 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 TTYH2Q9BSA4 534 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 ALG12Q9BV10 488 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 RNF32Q9H0A6 362 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 GAREM1Q9H706 876 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 NCDNQ9UBB6 729 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 COMMD3Q9UBI1 195 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 TRAV1-2A0A0B4J238 106 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 TMCC2O75069 709 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 NUDT14O95848 222 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 RENP00797 406 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 CDKN2AP42771 156 aaKnown RBP20.99■□□□□ 0.95
VPS16-201ENST00000380443 E2F1Q01094 437 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 NHLH1Q02575 133 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 SLC3A1Q07837 685 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 CDK5R1Q15078 307 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 LINC01590Q5TEZ4 76 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 ZNF385CQ66K41 422 aaPredicted RBP20.99■□□□□ 0.95
VPS16-201ENST00000380443 PWWP2BQ6NUJ5 590 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 CEACAM19Q7Z692 300 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 APCDD1LQ8NCL9 501 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 OR2T4Q8NH00 348 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 CHAC2Q8WUX2 184 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 THAP4Q8WY91 577 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 DEPDC7Q96QD5 511 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 RXFP3Q9NSD7 469 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 FAM86C1Q9NVL1 165 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 C14orf119Q9NWQ9 140 aa20.99■□□□□ 0.95
VPS16-201ENST00000380443 C19orf25Q9UFG5 118 aaPredicted RBP20.99■□□□□ 0.95
VPS16-201ENST00000380443 SHISA3A0PJX4 238 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 A8MVM7 634 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 CENPAP49450 140 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 EVX1P49640 407 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 DESI1Q6ICB0 168 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 CCBE1Q6UXH8 406 aaPredicted RBP20.98■□□□□ 0.95
VPS16-201ENST00000380443 TRILQ7L0X0 811 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 SSX6Q7RTT6 188 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 SLC38A9Q8NBW4 561 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 OR5J2Q8NH18 312 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 GHSRQ92847 366 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 PELI1Q96FA3 418 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 ZC3H10Q96K80 434 aaKnown RBP20.98■□□□□ 0.95
VPS16-201ENST00000380443 TAS2R10Q9NYW0 307 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 GRIP1Q9Y3R0 1128 aa20.98■□□□□ 0.95
VPS16-201ENST00000380443 FER1L5A0AVI2 2057 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 MUC6Q6W4X9 2439 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 NPIPB7O75200 414 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 TRIM3O75382 744 aaPredicted RBP20.97■□□□□ 0.95
VPS16-201ENST00000380443 ARL6IP5O75915 188 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 TACSTD2P09758 323 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 NAA10P41227 235 aaPredicted RBP20.97■□□□□ 0.95
VPS16-201ENST00000380443 C17orf67Q0P5P2 114 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 ASAH1Q13510 395 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 TRA2AQ13595 282 aaKnown RBP eCLIP20.97■□□□□ 0.95
VPS16-201ENST00000380443 IL11RAQ14626 422 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 QPRTQ15274 297 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 GXYLT1Q4G148 440 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 ACSM3Q53FZ2 586 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 FAM69AQ5T7M9 428 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 EID2Q8N6I1 236 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 OR6K6Q8NGW6 343 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 ST8SIA1Q92185 356 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 TTC9Q92623 222 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 UBL7Q96S82 380 aaPredicted RBP20.97■□□□□ 0.95
VPS16-201ENST00000380443 TBC1D24Q9ULP9 559 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 TMED7-TICAM2A0A0A6YYA0 188 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 OR2T1O43869 369 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 CPNE3O75131 537 aaKnown RBP20.97■□□□□ 0.95
VPS16-201ENST00000380443 CER1O95813 267 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 FGF5P12034 268 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 DLX5P56178 289 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 CAV3P56539 151 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 SGCBQ16585 318 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 TP53I3Q53FA7 332 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 OR51L1Q8NGJ5 315 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 RPS4Y2Q8TD47 263 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 ZNF524Q96C55 264 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 TXNDC15Q96J42 360 aa20.97■□□□□ 0.95
VPS16-201ENST00000380443 TMED7Q9Y3B3 224 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms