RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 PRTFDC1Q9NRG1 225 aa9.98□□□□□ -0.81
BEST1-201ENST00000378043 MRPL15Q9P015 296 aaKnown RBP9.98□□□□□ -0.81
BEST1-201ENST00000378043 OR10H1Q9Y4A9 318 aa9.98□□□□□ -0.81
BEST1-201ENST00000378043 BLOC1S5-TXNDC5H3BN57 136 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 AIPO00170 330 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 GPR171O14626 319 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 HPXP02790 462 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 H2AFB2P0C5Z0 115 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 ANXA3P12429 323 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 RAG2P55895 527 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 CLDN12P56749 244 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 DYRK1AQ13627 763 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 CLPPQ16740 277 aaPredicted RBP9.97□□□□□ -0.81
BEST1-201ENST00000378043 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.97□□□□□ -0.81
BEST1-201ENST00000378043 ZSWIM7Q19AV6 140 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 FNDC7Q5VTL7 733 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 LEG1Q6P5S2 330 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 ZNF595Q8IYB9 648 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 LRRC75AQ8NAA5 344 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 FAM71CQ8NEG0 241 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 OR11G2Q8NGC1 345 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 ZNF431Q8TF32 576 aaPredicted RBP9.97□□□□□ -0.81
BEST1-201ENST00000378043 HEXA-AS1Q9H8Q6 139 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 MRPL39Q9NYK5 338 aaKnown RBP9.97□□□□□ -0.81
BEST1-201ENST00000378043 ING4Q9UNL4 249 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 ZNF281Q9Y2X9 895 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 ANKRD61A6NGH8 418 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 ZNF749O43361 778 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 SULT1A3P0DMM9 295 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 SULT1A4P0DMN0 295 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 POU3F3P20264 500 aaPredicted RBP9.97□□□□□ -0.81
BEST1-201ENST00000378043 PSMD4P55036 377 aaKnown RBP9.97□□□□□ -0.81
BEST1-201ENST00000378043 ZP1P60852 638 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 PRPS1P60891 318 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 RPS15P62841 145 aaKnown RBP9.97□□□□□ -0.81
BEST1-201ENST00000378043 EGR4Q05215 589 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 LTBQ06643 244 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 CAMK2DQ13557 499 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 IL10RAQ13651 578 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 ZBTB37Q5TC79 503 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 SLC22A10Q63ZE4 541 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 ARMC6Q6NXE6 501 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 APOOLQ6UXV4 268 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 BAIAP2L2Q6UXY1 529 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 ZNF782Q6ZMW2 699 aaPredicted RBP9.97□□□□□ -0.81
BEST1-201ENST00000378043 SERPINA12Q8IW75 414 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 METTL27Q8N6F8 245 aaPredicted RBP9.97□□□□□ -0.81
BEST1-201ENST00000378043 PHYHIPQ92561 330 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 HGDQ93099 445 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 CMTM3Q96MX0 182 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 MAP3K3Q99759 626 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 C7orf50Q9BRJ6 194 aaKnown RBP9.97□□□□□ -0.81
BEST1-201ENST00000378043 BEX1Q9HBH7 125 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 GPR27Q9NS67 375 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 STMN3Q9NZ72 180 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 TEKT2Q9UIF3 430 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 FLVCR2Q9UPI3 526 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 HIF3AQ9Y2N7 669 aa9.97□□□□□ -0.81
BEST1-201ENST00000378043 NUP210LQ5VU65 1888 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 SHISA7A6NL88 538 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 B4DGG1 531 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 TNFRSF10AO00220 468 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 TSC22D2O75157 780 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 UPK3AO75631 287 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 THEGLP0DJG4 465 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 OR3A3P47888 321 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 MAZP56270 477 aaKnown RBP9.96□□□□□ -0.81
BEST1-201ENST00000378043 P2RX3P56373 397 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 PER3P56645 1201 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 HSF2Q03933 536 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 ZNF74Q16587 644 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 SFRP4Q6FHJ7 346 aaPredicted RBP9.96□□□□□ -0.81
BEST1-201ENST00000378043 FCRLAQ7L513 359 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 ATG4DQ86TL0 474 aaPredicted RBP9.96□□□□□ -0.81
BEST1-201ENST00000378043 ZNF433Q8N7K0 673 aaPredicted RBP9.96□□□□□ -0.81
BEST1-201ENST00000378043 OR52I2Q8NH67 350 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 OR56B4Q8NH76 319 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 ZDHHC1Q8WTX9 485 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 SLC19A3Q9BZV2 496 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 RANBP3Q9H6Z4 567 aaPredicted RBP9.96□□□□□ -0.81
BEST1-201ENST00000378043 FKRPQ9H9S5 495 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 LIN7BQ9HAP6 207 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 UCKL1Q9NWZ5 548 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 ELF5Q9UKW6 265 aaPredicted RBP9.96□□□□□ -0.81
BEST1-201ENST00000378043 RCE1Q9Y256 329 aa9.96□□□□□ -0.81
BEST1-201ENST00000378043 MRPS33Q9Y291 106 aaKnown RBP9.96□□□□□ -0.81
BEST1-201ENST00000378043 WDR87Q6ZQQ6 2873 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 MEIKINA0A087WXM9 373 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 TMEM72A0PK05 275 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 G3V3Q6 166 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 SRPX2O60687 465 aaPredicted RBP9.96□□□□□ -0.82
BEST1-201ENST00000378043 OR8G3PP0DMU2 310 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 PTHLHP12272 177 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 CTSEP14091 401 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 ADRA2CP18825 462 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 PTH2RP49190 550 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 CCR9P51686 369 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 ANGPT1Q15389 498 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 PWWP2BQ6NUJ5 590 aa9.96□□□□□ -0.82
BEST1-201ENST00000378043 SEZ6L2Q6UXD5 910 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms