RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 OR5J2Q8NH18 312 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 HIST1H2ACQ93077 130 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 SGTBQ96EQ0 304 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 DHRS1Q96LJ7 313 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 RHCGQ9UBD6 479 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 POMPQ9Y244 141 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 ENO4A6NNW6 628 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 C19orf84I3L1E1 186 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 KPNA4O00629 521 aaPredicted RBP11.75□□□□□ -0.53
CKAP2-202ENST00000378034 MRPL33O75394 65 aaKnown RBP11.75□□□□□ -0.53
CKAP2-202ENST00000378034 NQO1P15559 274 aaKnown RBP11.75□□□□□ -0.53
CKAP2-202ENST00000378034 PTNP21246 168 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 UQCRC1P31930 480 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 CD79BP40259 229 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 MAGEA2P43356 314 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 PMS2P3Q13401 168 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 FLOT2Q14254 428 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 MBOAT2Q6ZWT7 520 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 CREB3L2Q70SY1 520 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 GPAT4Q86UL3 456 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 LSRQ86X29 649 aaPredicted RBP11.75□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF100Q8IYN0 542 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 SEPHS2Q99611 448 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 C12orf49Q9H741 205 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 GALNT8Q9NY28 637 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.75□□□□□ -0.53
CKAP2-202ENST00000378034 SLC7A8Q9UHI5 535 aa11.75□□□□□ -0.53
CKAP2-202ENST00000378034 MS4A18H0YCH9 400 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 PLPP3O14495 311 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 OR7A10O76100 309 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 ASAH2BP0C7U1 165 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF43P17038 809 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 CBLP22681 906 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 PRKCDQ05655 676 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 ZP4Q12836 540 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 PTPN13Q12923 2485 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 MS4A18Q3C1V0 323 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF730Q6ZMV8 503 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 ASRGL1Q7L266 308 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 RRM2BQ7LG56 351 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 SLC46A3Q7Z3Q1 461 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 CDK20Q8IZL9 346 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 PFN4Q8NHR9 129 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 APH1AQ96BI3 265 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF775Q96BV0 537 aaPredicted RBP11.74□□□□□ -0.53
CKAP2-202ENST00000378034 NOX1Q9Y5S8 564 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 A0A087WUU8 490 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 OR6C65A6NJZ3 312 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 LRRN3E7EW58 273 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 KRT36O76013 467 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 OR6A2O95222 327 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 RAP2AP10114 183 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 POU2F1P14859 743 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 FUT1P19526 365 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 PUDPQ08623 228 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 C1DQ13901 141 aaKnown RBP11.74□□□□□ -0.53
CKAP2-202ENST00000378034 ANKDD1AQ495B1 522 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 PXKQ7Z7A4 578 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 DMRTC2Q8IXT2 367 aaPredicted RBP11.74□□□□□ -0.53
CKAP2-202ENST00000378034 ZIC4Q8N9L1 334 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 SLC7A13Q8TCU3 470 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 BPIFA2Q96DR5 249 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 KRCC1Q9NPI7 259 aaPredicted RBP11.74□□□□□ -0.53
CKAP2-202ENST00000378034 C20orf141Q9NUB4 165 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 B3GAT1Q9P2W7 334 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 SEC14L4Q9UDX3 406 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 RCE1Q9Y256 329 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 TMEM5Q9Y2B1 443 aa11.74□□□□□ -0.53
CKAP2-202ENST00000378034 COL12A1Q99715 3063 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 AKAP8O43823 692 aaKnown RBP11.73□□□□□ -0.53
CKAP2-202ENST00000378034 DIRAS1O95057 198 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 GADD45GO95257 159 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 IFI30P13284 250 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 COX6B1P14854 86 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 P2RY6Q15077 328 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 PODNL1Q6PEZ8 512 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 MEX3BQ6ZN04 569 aaKnown RBP11.73□□□□□ -0.53
CKAP2-202ENST00000378034 Q6ZT83 130 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 AAED1Q7RTV5 226 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 NANOGNBQ7Z5D8 188 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 EPHX4Q8IUS5 362 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 UEVLDQ8IX04 471 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 NRMQ8IXM6 262 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 HDHD5Q9BXW7 423 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 OR10A4Q9H209 315 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 TESMINQ9Y4I5 508 aa11.73□□□□□ -0.53
CKAP2-202ENST00000378034 UTP20O75691 2785 aaKnown RBP11.73□□□□□ -0.53
CKAP2-202ENST00000378034 TSPAN19P0C672 248 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 ADORA3P0DMS8 318 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 FUT4P22083 530 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 NTF4P34130 210 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 SLC9A3P48764 834 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 IL1RL1Q01638 556 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 SPIBQ01892 262 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 FOXD4Q12950 439 aaPredicted RBP11.72□□□□□ -0.53
CKAP2-202ENST00000378034 FGD3Q5JSP0 725 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 FBXW9Q5XUX1 488 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 CASP12Q6UXS9 341 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 TMPRSS11FQ6ZWK6 438 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 ADGRG5Q8IZF4 528 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms