RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ZNF251Q9BRH9 671 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 SLC30A2Q9BRI3 323 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 CCDC32Q9BV29 185 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 EXOSC3Q9NQT5 275 aaKnown RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 GSN-AS1Q9NRJ2 163 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 C14orf119Q9NWQ9 140 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 ASB6Q9NWX5 421 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 ING4Q9UNL4 249 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 TMEM184BQ9Y519 407 aaPredicted RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 A0A087WUJ7 227 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 FRG2CA6NGY1 282 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 H3BMH7 237 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 SCDO00767 359 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 CDRT1O95170 752 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 DHFRP00374 187 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 C1QBP02746 253 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 APEHP13798 732 aaKnown RBP7.52□□□□□ -1.21
UBR4-202ENST00000375224 MYL9P24844 172 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 RAB25P57735 213 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 MAB21L1Q13394 359 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 DOC2BQ14184 412 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 QPRTQ15274 297 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 KLHL26Q53HC5 615 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 WBP2NLQ6ICG8 309 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 CCDC190Q86UF4 302 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 ZNF485Q8NCK3 441 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 OR51G2Q8NGK0 314 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 OR6M1Q8NGM8 313 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 OR51A7Q8NH64 312 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 PTPMT1Q8WUK0 201 aaPredicted RBP7.52□□□□□ -1.21
UBR4-202ENST00000375224 DAZLQ92904 295 aaKnown RBP7.52□□□□□ -1.21
UBR4-202ENST00000375224 SLC25A46Q96AG3 418 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 LCORQ96JN0 433 aaPredicted RBP7.52□□□□□ -1.21
UBR4-202ENST00000375224 SLC41A2Q96JW4 573 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 NPAS1Q99742 590 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 SNTG1Q9NSN8 517 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 HAO2Q9NYQ3 351 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 GPN3Q9UHW5 284 aaPredicted RBP7.52□□□□□ -1.21
UBR4-202ENST00000375224 SF3B6Q9Y3B4 125 aaKnown RBP7.52□□□□□ -1.21
UBR4-202ENST00000375224 SIT1Q9Y3P8 196 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 J3QRE1 110 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 TOX3O15405 576 aaPredicted RBP7.52□□□□□ -1.21
UBR4-202ENST00000375224 SPTBP11277 2137 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 PTNP21246 168 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 SLC37A1P57057 533 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 RPS7P62081 194 aaKnown RBP7.52□□□□□ -1.21
UBR4-202ENST00000375224 ACTC1P68032 377 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 ACTA1P68133 377 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 PSPHP78330 225 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 KCNAB1Q14722 419 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 ZMAT1Q5H9K5 638 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 SLC35F1Q5T1Q4 408 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 HLA-DQA1Q5Y7H0 255 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 C3orf33Q6P1S2 294 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 CD200R1LQ6Q8B3 271 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 ZNF322Q6U7Q0 402 aaPredicted RBP7.52□□□□□ -1.21
UBR4-202ENST00000375224 KIRREL2Q6UWL6 708 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 SHFQ7M4L6 423 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 LUZP2Q86TE4 346 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 GPALPP1Q8IXQ4 340 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 SLC35F3Q8IY50 421 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 BBS1Q8NFJ9 593 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 OR4M1Q8NGD0 313 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 OR14A16Q8NHC5 309 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 TM9SF4Q92544 642 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 WDFY2Q96P53 400 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 TNFRSF13CQ96RJ3 184 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 KCNS3Q9BQ31 491 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 DUSP23Q9BVJ7 150 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 LDAHQ9H6V9 325 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 UBQLN2Q9UHD9 624 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 ABCA7Q8IZY2 2146 aa7.52□□□□□ -1.21
UBR4-202ENST00000375224 TP53BP1Q12888 1972 aaPredicted RBP7.52□□□□□ -1.21
UBR4-202ENST00000375224 TRAV27A0A087WT01 109 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 IGKV3D-11A0A0A0MRZ8 115 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 A0A1B0GVT2 93 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 DAPL1A0PJW8 107 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 FAM183AA6NL82 134 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 K7ESF4 209 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 GTPBP1O00178 669 aaKnown RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 CLPSP04118 112 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 PNLIPP16233 465 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 OR1D4P47884 311 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 TAS2R43P59537 309 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 SRSF5Q13243 272 aaKnown RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 TNK1Q13470 666 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 TRAM1Q15629 374 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 LCN1P1Q5VSP4 162 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 C22orf42Q6IC83 251 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 THSD4Q6ZMP0 1018 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 TCTE3Q8IZS6 198 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 SLC25A45Q8N413 288 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 FAM71CQ8NEG0 241 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 OR4C3Q8NH37 302 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 OR1L3Q8NH93 324 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 SETD6Q8TBK2 473 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 SPRYD4Q8WW59 207 aaPredicted RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 PFDN5Q99471 154 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 TEAD3Q99594 435 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 SSX3Q99909 188 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms