RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 MMP20O60882 483 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 LRP3O75074 770 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 GGCTO75223 188 aaKnown RBP7.26□□□□□ -1.25
USP48-203ENST00000374732 CSO75390 466 aaKnown RBP7.26□□□□□ -1.25
USP48-203ENST00000374732 C4BPAP04003 597 aaKnown RBP7.26□□□□□ -1.25
USP48-203ENST00000374732 AKR1C4P17516 323 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 ACKR3P25106 362 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 S100A2P29034 98 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 CLCN3P51790 818 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 CLDN18P56856 261 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 CCL7P80098 99 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 LCN2P80188 198 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 FUT7Q11130 342 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 SRSF6Q13247 344 aaKnown RBP7.26□□□□□ -1.25
USP48-203ENST00000374732 EXOC3L2Q2M3D2 409 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 ZNF766Q5HY98 468 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 C6orf52Q5T4I8 152 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 CCDC144NLQ6NUI1 221 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 RNF44Q7L0R7 432 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 SLC47A2Q86VL8 602 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 YIPF7Q8N8F6 280 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 OR1K1Q8NGR3 316 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 DNASE1L2Q92874 299 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 ZNF75AQ96N20 296 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 SLC38A3Q99624 504 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 TMEM121Q9BTD3 319 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 RSG1Q9BU20 258 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 SLC29A3Q9BZD2 475 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 HAPLN2Q9GZV7 340 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 ATXN3LQ9H3M9 355 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 B3GAT2Q9NPZ5 323 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 HCN3Q9P1Z3 774 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 B3GAT1Q9P2W7 334 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 SERTAD3Q9UJW9 196 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 LRRC37A2A6NM11 1700 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 AQP7P3A6NL99 342 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 EEF2KO00418 725 aaKnown RBP7.26□□□□□ -1.25
USP48-203ENST00000374732 PDCD5O14737 125 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 RDH16O75452 317 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 OR2F2O95006 317 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 OR10J4P0C629 311 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 SMIM10L1P0DMW3 83 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 LIPCP11150 499 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 UNGP13051 313 aaPredicted RBP7.26□□□□□ -1.25
USP48-203ENST00000374732 HRH2P25021 359 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 RBMS1P29558 406 aaKnown RBP7.26□□□□□ -1.25
USP48-203ENST00000374732 ADRA1AP35348 466 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 SOX18P35713 384 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 HLCSP50747 726 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 TFAMQ00059 246 aaKnown RBP7.26□□□□□ -1.25
USP48-203ENST00000374732 MESP2Q0VG99 397 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 EXOSC2Q13868 293 aaKnown RBP7.26□□□□□ -1.25
USP48-203ENST00000374732 ZNF181Q2M3W8 571 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 ZNF699Q32M78 642 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 CCSMST1Q4G0I0 132 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 BICRALQ6AI39 1079 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 ZNF517Q6ZMY9 492 aaPredicted RBP7.26□□□□□ -1.25
USP48-203ENST00000374732 Q6ZVU0 165 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 OVCH1Q7RTY7 1134 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 TCTE3Q8IZS6 198 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 OR51D1Q8NGF3 324 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 LYPD6BQ8NI32 183 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 WDR20Q8TBZ3 569 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 TNFAIP8L1Q8WVP5 186 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 ASB15Q8WXK1 588 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 ARSGQ96EG1 525 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 SMIM10Q96HG1 83 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 TPSD1Q9BZJ3 242 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 SGK2Q9HBY8 427 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 MTMR10Q9NXD2 777 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 OR51B4Q9Y5P0 310 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 RFNGQ9Y644 331 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 DOCK5Q9H7D0 1870 aa7.26□□□□□ -1.25
USP48-203ENST00000374732 A0A1W2PQF6 199 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 C7orf72A4D263 438 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 C9JVG2 144 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 PPIHO43447 177 aaKnown RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 TSPAN12O95859 305 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 MT-CO2P00403 227 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 PDYNP01213 254 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 CYBBP04839 570 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 PMCHP20382 165 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 BRCC3P46736 316 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 RAB5CP51148 216 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 EFNA5P52803 228 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 RPL23AP62750 156 aaKnown RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 RAB39AQ14964 217 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 INPP5JQ15735 1006 aaPredicted RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 FAM69BQ5VUD6 431 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 DCAF12L2Q5VW00 463 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 SAXO2Q658L1 398 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 NAPRTQ6XQN6 538 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 CLNKQ7Z7G1 428 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 CROCCP2Q86T23 111 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 SHISA5Q8N114 240 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 ZNF564Q8TBZ8 553 aaPredicted RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 RNASEH2CQ8TDP1 164 aaKnown RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 RXFP4Q8TDU9 374 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 PTH2Q96A98 100 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 RGMAQ96B86 450 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 227.9 ms