RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 NIT2Q9NQR4 276 aa13.17□□□□□ -0.3
A1CF-202ENST00000373993 TMEM100Q9NV29 134 aa13.17□□□□□ -0.3
A1CF-202ENST00000373993 ASH2LQ9UBL3 628 aa13.17□□□□□ -0.3
A1CF-202ENST00000373993 TNRC6BQ9UPQ9 1833 aaKnown RBP13.17□□□□□ -0.3
A1CF-202ENST00000373993 CKAP5Q14008 2032 aa13.17□□□□□ -0.3
A1CF-202ENST00000373993 ADAMTS9Q9P2N4 1935 aa13.17□□□□□ -0.3
A1CF-202ENST00000373993 CDHR4A6H8M9 788 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 KLHL18O94889 574 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 PCDH8O95206 1070 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 SPDEFO95238 335 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 ALPIP09923 528 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 ATP1B2P14415 290 aaPredicted RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 SNRPBP14678 240 aaKnown RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 ACADLP28330 430 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 CSNK1EP49674 416 aaKnown RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 SMCO1Q147U7 214 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 NKPD1Q17RQ9 610 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 RPS26P11Q5JNZ5 115 aaPredicted RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 NIPAL3Q6P499 406 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 ARL9Q6T311 187 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 ZNF620Q6ZNG0 422 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 ZNF546Q86UE3 836 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 ZNF671Q8TAW3 534 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 TFGQ92734 400 aaPredicted RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 ARL11Q969Q4 196 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 MRGPRX1Q96LB2 322 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 CNTNAP3BQ96NU0 1288 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 MS4A4EQ96PG1 132 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 ARHGDIGQ99819 225 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 OPA3Q9H6K4 179 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 TUBA4BQ9H853 241 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 TAAR2Q9P1P5 351 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 THAP10Q9P2Z0 257 aaPredicted RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 UPB1Q9UBR1 384 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 LNP1A1A4G5 178 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 ZNF821O75541 412 aaPredicted RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 PMS2P2O95744 297 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 CSF1P09603 554 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 HNF1BP35680 557 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 KCNJ3P48549 501 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 ARHGDIBP52566 201 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 CASP9P55211 416 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 B4GALNT1Q00973 533 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 SLC3A1Q07837 685 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 PDZK1IP1Q13113 114 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 SERTAD2Q14140 314 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 FNDC3BQ53EP0 1204 aaKnown RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 STPG1Q5TH74 334 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 RNF219Q5W0B1 726 aaPredicted RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 LYSMD4Q5XG99 296 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 JMJD6Q6NYC1 403 aaPredicted RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 FAM199XQ6PEV8 388 aaPredicted RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 BEND4Q6ZU67 534 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 TMPRSS11BQ86T26 416 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 CFAP206Q8IYR0 622 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 CFAP52Q8N1V2 620 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 SIRT6Q8N6T7 355 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 GPR156Q8NFN8 814 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 STOML3Q8TAV4 291 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 TCTEX1D2Q8WW35 142 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 RAD51AP1Q96B01 352 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 CMSS1Q9BQ75 279 aaKnown RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 PAPOLGQ9BWT3 736 aaKnown RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 HINT3Q9NQE9 182 aaKnown RBP13.16□□□□□ -0.3
A1CF-202ENST00000373993 FSCN3Q9NQT6 498 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 SMCO4Q9NRQ5 59 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 TMEM74BQ9NUR3 256 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 MIOXQ9UGB7 285 aa13.16□□□□□ -0.3
A1CF-202ENST00000373993 PLXNB3Q9ULL4 1909 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 IGHV1OR15-9A0A0B4J2B8 117 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 A0A1B0GVC2 190 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 OR6C68A6NDL8 312 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 A6NIN4 97 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 EFCAB7A8K855 629 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 GPR31O00270 319 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 CLDN7O95471 211 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 C1GALT1C1LP0DN25 315 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 CD79AP11912 226 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 ZNF35P13682 527 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 HLA-GP17693 338 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 CD70P32970 193 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 PTH2RP49190 550 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 PGDP52209 483 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 PCBP4P57723 403 aaKnown RBP13.15□□□□□ -0.3
A1CF-202ENST00000373993 CD81P60033 236 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 RPS24P62847 133 aaKnown RBP13.15□□□□□ -0.3
A1CF-202ENST00000373993 UBE2IP63279 158 aaKnown RBP13.15□□□□□ -0.3
A1CF-202ENST00000373993 PEA15Q15121 130 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 VWA2Q5GFL6 755 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 GLT8D1Q68CQ7 371 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 HEPHL1Q6MZM0 1159 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 ACOT7LQ6ZUV0 252 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 OR2W3Q7Z3T1 314 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 RXFP4Q8TDU9 374 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 SKA2Q8WVK7 121 aaPredicted RBP13.15□□□□□ -0.3
A1CF-202ENST00000373993 DIO2Q92813 273 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 HAVCR1Q96D42 359 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 LRFN5Q96NI6 719 aa13.15□□□□□ -0.3
A1CF-202ENST00000373993 GINS4Q9BRT9 223 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms