RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 BPNT1O95861 308 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 SNAI1O95863 264 aaPredicted RBP11.8□□□□□ -0.52
GPC4-201ENST00000370828 ZNF805Q5CZA5 627 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 FAM26EQ8N5C1 309 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 OR4K17Q8NGC6 315 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 ZNF480Q8WV37 535 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 GCDHQ92947 438 aaPredicted RBP11.8□□□□□ -0.52
GPC4-201ENST00000370828 ACSS1Q9NUB1 689 aaPredicted RBP11.8□□□□□ -0.52
GPC4-201ENST00000370828 QDPRP09417 244 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 NQO2P16083 231 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 NDUFS1P28331 727 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 ZNF136P52737 540 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 SNRPEP62304 92 aaKnown RBP11.8□□□□□ -0.52
GPC4-201ENST00000370828 GGTA1PQ4G0N0 100 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 KIAA0319Q5VV43 1072 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 HIST2H3AQ71DI3 136 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 HPSE2Q8WWQ2 592 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 FOXJ1Q92949 421 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 TMEM106AQ96A25 262 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 UPRTQ96BW1 309 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 MEGF10Q96KG7 1140 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 TECTBQ96PL2 329 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 OR7D2Q96RA2 312 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 OR52A5Q9H2C5 316 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 NCOR1P1Q9H4R4 102 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 ESRP2Q9H6T0 727 aaKnown RBP11.8□□□□□ -0.52
GPC4-201ENST00000370828 AUNIPQ9H7T9 357 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 SLC6A14Q9UN76 642 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 CACNA1CQ13936 2221 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 SYT7O43581 403 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 LAG3P18627 525 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 HSD11B2P80365 405 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 IFITM2Q01629 132 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 DSC1Q08554 894 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 TRAPPC6BQ86SZ2 158 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 METTL27Q8N6F8 245 aaPredicted RBP11.79□□□□□ -0.52
GPC4-201ENST00000370828 POFUT1Q9H488 388 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 HRASLSQ9HDD0 168 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 GABARAPH6UMI1 98 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 PMS2P2O95744 297 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 FURINP09958 794 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 SLC6A11P48066 632 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 SOX9P48436 509 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 CTSCP53634 463 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 USP50Q70EL3 339 aaPredicted RBP11.79□□□□□ -0.52
GPC4-201ENST00000370828 CBARPQ8N350 705 aaPredicted RBP11.79□□□□□ -0.52
GPC4-201ENST00000370828 UBAC2Q8NBM4 344 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 C16orf58Q96GQ5 468 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 ELF4Q99607 663 aaPredicted RBP11.79□□□□□ -0.52
GPC4-201ENST00000370828 G6PC3Q9BUM1 346 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 PRRG4Q9BZD6 226 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 SERINC1Q9NRX5 453 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 SEC14L5O43304 696 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 CD70P32970 193 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 BIDP55957 195 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 OR1Q1Q15612 314 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 MTURNQ8N3F0 131 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 L3MBTL4Q8NA19 623 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 OR51T1Q8NGJ9 327 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 OR52B4Q8NGK2 314 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 RSPRY1Q96DX4 576 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 MS4A4EQ96PG1 132 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 SYT3Q9BQG1 590 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 MS4A7Q9GZW8 240 aaPredicted RBP11.79□□□□□ -0.52
GPC4-201ENST00000370828 CHRDQ9H2X0 955 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 NELFAQ9H3P2 528 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 DRGXA6NNA5 263 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 SYT5O00445 386 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 DPM1O60762 260 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 TAGLN2P37802 199 aaKnown RBP11.79□□□□□ -0.52
GPC4-201ENST00000370828 MRPL19P49406 292 aaKnown RBP11.79□□□□□ -0.52
GPC4-201ENST00000370828 SNU13P55769 128 aaKnown RBP11.79□□□□□ -0.52
GPC4-201ENST00000370828 PMPCAQ10713 525 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 TSTD1Q8NFU3 115 aa11.79□□□□□ -0.52
GPC4-201ENST00000370828 LEFTY2O00292 366 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 ZNF593O00488 134 aaPredicted RBP11.78□□□□□ -0.52
GPC4-201ENST00000370828 STK17BO94768 372 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 C1QAP02745 245 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 CLINT1Q14677 625 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 PLA2G15Q8NCC3 412 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 PLPP5Q8NEB5 264 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 PGAM5Q96HS1 289 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 ATF6BQ99941 703 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 TMEM38AQ9H6F2 299 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 C11orf49Q9H6J7 331 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 FN3KRPQ9HA64 309 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 RGPD8O14715 1765 aaPredicted RBP11.78□□□□□ -0.52
GPC4-201ENST00000370828 LATO43561 262 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 POU3F3P20264 500 aaPredicted RBP11.78□□□□□ -0.52
GPC4-201ENST00000370828 GRM7Q14831 915 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 TOMM34Q15785 309 aaPredicted RBP11.78□□□□□ -0.52
GPC4-201ENST00000370828 SGCAQ16586 387 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 FAM27D1Q5T7N8 215 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 CARD17Q5XLA6 110 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 PPP1R3BQ86XI6 285 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 TMEM99Q8N816 258 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 HSD17B11Q8NBQ5 300 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 A0A1B0GV72 72 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 AK1P00568 194 aa11.78□□□□□ -0.52
GPC4-201ENST00000370828 INHBBP09529 407 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms