RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 IFNA10P01566 189 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 C1QAP02745 245 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 OR1S1Q8NH92 325 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 AP1S3Q96PC3 154 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 IGLV3-25P01717 112 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 EIF4EP06730 217 aaKnown RBP14.76□□□□□ -0.05
COL17A1-202ENST00000369733 ADRB1P08588 477 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 SLC6A12P48065 614 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 TMEM184AQ6ZMB5 413 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF836Q6ZNA1 936 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 OR51D1Q8NGF3 324 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 MIB2Q96AX9 1013 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 MCOLN1Q9GZU1 580 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 PRSS16Q9NQE7 514 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 HMGN4O00479 90 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 PLPP1O14494 284 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 CAMK2DQ13557 499 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 OR4D6Q8NGJ1 314 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 SLC2A12Q8TD20 617 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 SLC41A2Q96JW4 573 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 PDCD1LG2Q9BQ51 273 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 PIGMQ9H3S5 423 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 FAM212BQ9NTI7 297 aaPredicted RBP14.75□□□□□ -0.05
COL17A1-202ENST00000369733 VSX1Q9NZR4 365 aaPredicted RBP14.75□□□□□ -0.05
COL17A1-202ENST00000369733 A0A087WUU8 490 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 A0A1B0GWA3 101 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 CSF2RAP15509 400 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 PGFP49763 221 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 FLI1Q01543 452 aaPredicted RBP14.75□□□□□ -0.05
COL17A1-202ENST00000369733 FAM111BQ6SJ93 734 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 CMTM1Q8IZ96 169 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 OR51S1Q8NGJ8 323 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 OR5L2Q8NGL0 311 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 TEAD3Q99594 435 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 TIMM29Q9BSF4 260 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 NICN1Q9BSH3 213 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 MED18Q9BUE0 208 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 ERVMER34-1Q9H9K5 563 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 CPNE7Q9UBL6 633 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 TRAPPC4Q9Y296 219 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 PUS1Q9Y606 427 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL17A1-202ENST00000369733 KIF13AQ9H1H9 1805 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 D6RAR5 112 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 PRR35P0CG20 571 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 RPS2P15880 293 aaKnown RBP14.75□□□□□ -0.05
COL17A1-202ENST00000369733 P2RY2P41231 377 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 CX3CR1P49238 355 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 PER3P56645 1201 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 BATFQ16520 125 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 AANATQ16613 207 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 ST8SIA2Q92186 375 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 SPTSSAQ969W0 71 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 SLC6A20Q9NP91 592 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 NTSR1P30989 418 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 ACTBL2Q562R1 376 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 MMP21Q8N119 569 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 PFN4Q8NHR9 129 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 ANGPTL6Q8NI99 470 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 ADOQ96SZ5 270 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 CLDND1Q9NY35 253 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 PDE4DIPQ5VU43 2346 aa14.75□□□□□ -0.05
COL17A1-202ENST00000369733 TAS2R46P59540 309 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 NFATC4Q14934 902 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF765Q7L2R6 523 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 OR10R2Q8NGX6 335 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 FRZBQ92765 325 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 OR2A14Q96R47 310 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 WDR76Q9H967 626 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 PDFQ9HBH1 243 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 SMCO4Q9NRQ5 59 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 TMEM30AQ9NV96 361 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 GPATCH2Q9NW75 528 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 ARRDC5A6NEK1 342 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 SELENOFO60613 162 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 RAD52P43351 418 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 DPY19L4Q7Z388 723 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 FAM3DQ96BQ1 224 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 GIMAP5Q96F15 307 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 UBQLN4Q9NRR5 601 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 NCDNQ9UBB6 729 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 SLC22A7Q9Y694 548 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 TMEM202A6NGA9 273 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 TPOP07202 933 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 SERPINA2P20848 420 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 UBE2KP61086 200 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 MALLQ13021 153 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 SLC14A1Q13336 389 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 TERB2Q8NHR7 220 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 RNF128Q8TEB7 428 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 SLC25A21Q9BQT8 299 aaPredicted RBP14.74□□□□□ -0.05
COL17A1-202ENST00000369733 CRB3Q9BUF7 120 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 GFYI3L273 518 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 SLC2A10O95528 541 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF28P17035 718 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 IGFBP6P24592 240 aaPredicted RBP14.74□□□□□ -0.05
COL17A1-202ENST00000369733 ZBTB37Q5TC79 503 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 DPY19L2P2Q6ZN68 376 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 C17orf107Q6ZR85 190 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 LIX1LQ8IVB5 337 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 GPR137CQ8N3F9 429 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms