RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 MS4A18Q3C1V0 323 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 C1QTNF12Q5T7M4 302 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 OR7E24Q6IFN5 339 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 ERICH5Q6P6B1 374 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 H1FNTQ75WM6 255 aaPredicted RBP18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 GPAT4Q86UL3 456 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 LRRC75A-AS1Q8N1F1 130 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 KDM8Q8N371 416 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 POU5F2Q8N7G0 328 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 POMGNT2Q8NAT1 580 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 ZNF417Q8TAU3 575 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 PIGTQ969N2 578 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 SLC25A36Q96CQ1 311 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 OXGR1Q96P68 337 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 ZNF587Q96SQ5 575 aaPredicted RBP18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 DLL4Q9NR61 685 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 CMTM6Q9NX76 183 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 RNF115Q9Y4L5 304 aa18.04■□□□□ 0.48
SMNDC1-201ENST00000369592 FAM220BPB1ANY3 271 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 AIM2O14862 343 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 CHP2O43745 196 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 CCDC22O60826 627 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 COX4I1P13073 169 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 SELENOPP49908 381 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 SEC24CP53992 1094 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 NCALDP61601 193 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 BSPH1Q075Z2 132 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 ENTPD8Q5MY95 495 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 LINGO2Q7L985 606 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 SLC15A3Q8IY34 581 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 C17orf78Q8N4C9 275 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 SCAIQ8N9R8 606 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 RASSF5Q8WWW0 418 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 MOGAT1Q96PD6 335 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 LINC00470Q9BZP3 86 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 ESRP2Q9H6T0 727 aaKnown RBP18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 RCE1Q9Y256 329 aa18.03■□□□□ 0.48
SMNDC1-201ENST00000369592 CCT8L1PA6NM43 557 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 TRAF3IP2O43734 574 aaPredicted RBP18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 HPRP00739 348 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 CD3EP07766 207 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 DRD4P21917 467 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 LGALS3BPQ08380 585 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 MFSD13AQ14CX5 517 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 STK11Q15831 433 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 SPATA21Q7Z572 469 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 ADAMTS16Q8TE57 1224 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 AKAP1Q92667 903 aaKnown RBP eCLIP18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 MUCL1Q96DR8 90 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 EPYCQ99645 322 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 PRSS27Q9BQR3 290 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 SLC17A5Q9NRA2 495 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 MRPL39Q9NYK5 338 aaKnown RBP18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 UPB1Q9UBR1 384 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 CORINQ9Y5Q5 1042 aa18.02■□□□□ 0.48
SMNDC1-201ENST00000369592 CIB4A0PJX0 185 aa18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 OR6C65A6NJZ3 312 aa18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 SHISA9B4DS77 424 aa18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 TMCC2O75069 709 aa18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 DANCRP0C864 163 aa18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 KDELR2P33947 212 aa18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 SLC25A3Q00325 362 aa18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 ALKBH2Q6NS38 261 aa18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 HACD2Q6Y1H2 254 aa18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 ELAC2Q9BQ52 826 aaKnown RBP18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 ZNF701Q9NV72 531 aaPredicted RBP18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 SELENONQ9NZV5 590 aa18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 GMPR2Q9P2T1 348 aaKnown RBP18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 AP3M1Q9Y2T2 418 aa18.01■□□□□ 0.47
SMNDC1-201ENST00000369592 TRAPPC13A5PLN9 417 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 CPSF4LA6NMK7 179 aaKnown RBP18■□□□□ 0.47
SMNDC1-201ENST00000369592 LRRN3E7EW58 273 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 RPL36A-HNRNPH2H7BZ11 118 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 SNX3O60493 162 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 UPK3AO75631 287 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 ZNF43P17038 809 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 LSP1P33241 339 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 FOXD4Q12950 439 aaPredicted RBP18■□□□□ 0.47
SMNDC1-201ENST00000369592 ZNF672Q499Z4 452 aaPredicted RBP18■□□□□ 0.47
SMNDC1-201ENST00000369592 ARPINQ7Z6K5 226 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 MICU2Q8IYU8 434 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 TMEM123Q8N131 208 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 WFDC11Q8NEX6 87 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 ANKK1Q8NFD2 765 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 OR2T12Q8NG77 320 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 OR52N5Q8NH56 324 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 VANGL1Q8TAA9 524 aaPredicted RBP18■□□□□ 0.47
SMNDC1-201ENST00000369592 NEUROG1Q92886 237 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 MPP4Q96JB8 637 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 CCL19Q99731 98 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 GSX2Q9BZM3 304 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 BAG5Q9UL15 447 aa18■□□□□ 0.47
SMNDC1-201ENST00000369592 OVOL3O00110 214 aa17.99■□□□□ 0.47
SMNDC1-201ENST00000369592 MT-ATP6P00846 226 aa17.99■□□□□ 0.47
SMNDC1-201ENST00000369592 HLA-DOBP13765 273 aa17.99■□□□□ 0.47
SMNDC1-201ENST00000369592 CLDN17P56750 224 aa17.99■□□□□ 0.47
SMNDC1-201ENST00000369592 NKX6-1P78426 367 aaPredicted RBP17.99■□□□□ 0.47
SMNDC1-201ENST00000369592 TGFBR3Q03167 851 aa17.99■□□□□ 0.47
SMNDC1-201ENST00000369592 C9orf135Q5VTT2 229 aa17.99■□□□□ 0.47
SMNDC1-201ENST00000369592 SHEQ5VZ18 495 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms