RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PPP1R32Q7Z5V6 425 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF511Q8NB15 262 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 ASB13Q8WXK3 278 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 MTERF1Q99551 399 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 CMSS1Q9BQ75 279 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 RIBC2Q9H4K1 309 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 PLSCR2Q9NRY7 297 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 GHRLQ9UBU3 117 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 KCNK6Q9Y257 313 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 ASF1AQ9Y294 204 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 A0A096LPI6 279 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 COLCA2A8K830 154 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 GTPBP1O00178 669 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 PRMT3O60678 531 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 DNAJB6O75190 326 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 CBR3O75828 277 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 CLDN9O95484 217 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 STSP08842 583 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 LINC00614P0C842 121 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 PLA2G2AP14555 144 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 CXCL3P19876 107 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 PVALBP20472 110 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 C21orf33P30042 268 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 DNAJA1P31689 397 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 MAS1LP35410 378 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 BDKRB1P46663 353 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 POLR2JP52435 117 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 REEP5Q00765 189 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 FOXC1Q12948 553 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 DOC2BQ14184 412 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 PTGR1Q14914 329 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 ABRAXAS2Q15018 415 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 KIAA0040Q15053 153 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 C6orf136Q5SQH8 315 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 POMZP3Q6PJE2 187 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 LCTLQ6UWM7 567 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 GLCCI1Q86VQ1 547 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 MEIOBQ8N635 442 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 NUDT8Q8WV74 236 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 NR4A3Q92570 626 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 OSTF1Q92882 214 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 TM4SF18Q96CE8 201 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 MS4A3Q96HJ5 214 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 MGLLQ99685 303 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 C7orf50Q9BRJ6 194 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 UTP23Q9BRU9 249 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 TUBB1Q9H4B7 451 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 PRDM13Q9H4Q3 707 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 ANKRA2Q9H9E1 313 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 LOC100506127A0A0U1RQW1 187 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 GNG14A0A1W2PPG7 69 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 A0A1W2PQL4 384 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 PRSS47A8MTI9 375 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 NUDT19A8MXV4 375 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 MCRIP1C9JLW8 97 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 GNGT2O14610 69 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 EIF4E2O60573 245 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 PPP3CBP16298 524 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 LCN1P31025 176 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 NPRL3Q12980 569 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 PWP1Q13610 501 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 GPR176Q14439 515 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 HLXQ14774 488 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF239Q16600 458 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 CD200R1LQ6Q8B3 271 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 PRICKLE2Q7Z3G6 844 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 Q8N402 240 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 C19orf18Q8NEA5 215 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 FAM71CQ8NEG0 241 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 AKR7LQ8NHP1 331 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 LURAP1Q96LR2 239 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 NDOR1Q9UHB4 597 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 HEBP2Q9Y5Z4 205 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 CHD8Q9HCK8 2581 aa6.27□□□□□ -1.4
CSDE1-204ENST00000369530 NUP214P35658 2090 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 STMND1H3BQB6 276 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 IMPA2O14732 288 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 KRT33AO76009 404 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 CPSF4O95639 269 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 GIPP09681 153 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 TSPAN19P0C672 248 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ACP5P13686 325 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 CPN1P15169 458 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 FRKP42685 505 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 DLX5P56178 289 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 RAB5BP61020 215 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ERVK-25P63136 954 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 CRYZQ08257 329 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 C2orf80Q0P641 193 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 SEC23BQ15437 767 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 GSG1Q2KHT4 349 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 FAM74A1Q5RGS3 127 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 TRIQKQ629K1 86 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 RPUSD3Q6P087 351 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 TMPRSS11BQ86T26 416 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 PUSL1Q8N0Z8 303 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF248Q8NDW4 579 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 DNAJB8Q8NHS0 232 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 TCTN2Q96GX1 697 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF559Q9BR84 538 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms