RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 ABHD12BQ7Z5M8 362 aaPredicted RBP21.05■□□□□ 0.96
PFDN2-201ENST00000368010 CARM1Q86X55 608 aa21.05■□□□□ 0.96
PFDN2-201ENST00000368010 MICU2Q8IYU8 434 aa21.05■□□□□ 0.96
PFDN2-201ENST00000368010 C10orf53Q8N6V4 93 aa21.05■□□□□ 0.96
PFDN2-201ENST00000368010 ADPRHL1Q8NDY3 354 aa21.05■□□□□ 0.96
PFDN2-201ENST00000368010 C1orf162Q8NEQ5 155 aaPredicted RBP21.05■□□□□ 0.96
PFDN2-201ENST00000368010 PIGTQ969N2 578 aa21.05■□□□□ 0.96
PFDN2-201ENST00000368010 CMTM5Q96DZ9 223 aa21.05■□□□□ 0.96
PFDN2-201ENST00000368010 HOPXQ9BPY8 73 aaPredicted RBP21.05■□□□□ 0.96
PFDN2-201ENST00000368010 ASPNQ9BXN1 380 aa21.05■□□□□ 0.96
PFDN2-201ENST00000368010 MYLK2Q9H1R3 596 aa21.05■□□□□ 0.96
PFDN2-201ENST00000368010 B3GAT1Q9P2W7 334 aa21.05■□□□□ 0.96
PFDN2-201ENST00000368010 RCE1Q9Y256 329 aa21.05■□□□□ 0.96
PFDN2-201ENST00000368010 CLOCKO15516 846 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 BGLAPP02818 100 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 MPGP29372 298 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 KDELR2P33947 212 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 NUDT2P50583 147 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 GYS2P54840 703 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 CLDN17P56750 224 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 IL1RL1Q01638 556 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 LINC00114Q6XXX2 140 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 SLC15A3Q8IY34 581 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 C17orf78Q8N4C9 275 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 SCAIQ8N9R8 606 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 OR52N5Q8NH56 324 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 SLC41A3Q96GZ6 507 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 MPP4Q96JB8 637 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 CCL19Q99731 98 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 AMBRA1Q9C0C7 1298 aa21.04■□□□□ 0.96
PFDN2-201ENST00000368010 LOC102725191A0A1B0GVB3 256 aa21.03■□□□□ 0.96
PFDN2-201ENST00000368010 THY1P04216 161 aa21.03■□□□□ 0.96
PFDN2-201ENST00000368010 SLC7A2P52569 658 aa21.03■□□□□ 0.96
PFDN2-201ENST00000368010 LIPEQ05469 1076 aa21.03■□□□□ 0.96
PFDN2-201ENST00000368010 LTBQ06643 244 aa21.03■□□□□ 0.96
PFDN2-201ENST00000368010 BSPH1Q075Z2 132 aa21.03■□□□□ 0.96
PFDN2-201ENST00000368010 CYBRD1Q53TN4 286 aa21.03■□□□□ 0.96
PFDN2-201ENST00000368010 TTC33Q6PID6 262 aaPredicted RBP21.03■□□□□ 0.96
PFDN2-201ENST00000368010 HACD2Q6Y1H2 254 aa21.03■□□□□ 0.96
PFDN2-201ENST00000368010 TSPYL5Q86VY4 417 aaPredicted RBP21.03■□□□□ 0.96
PFDN2-201ENST00000368010 AKAP1Q92667 903 aaKnown RBP eCLIP21.03■□□□□ 0.96
PFDN2-201ENST00000368010 PIP5K1AQ99755 562 aa21.03■□□□□ 0.96
PFDN2-201ENST00000368010 MRPL39Q9NYK5 338 aaKnown RBP21.03■□□□□ 0.96
PFDN2-201ENST00000368010 SLC7A7Q9UM01 511 aa21.03■□□□□ 0.96
PFDN2-201ENST00000368010 SLC25A15Q9Y619 301 aa21.03■□□□□ 0.96
PFDN2-201ENST00000368010 DPRXA6NFQ7 191 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 ZNF587BE7ETH6 402 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 HS3ST1O14792 307 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 AKAP8O43823 692 aaKnown RBP21.02■□□□□ 0.96
PFDN2-201ENST00000368010 LYPD3O95274 346 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 MT-ATP6P00846 226 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 TNFRSF1BP20333 461 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 HOXC12P31275 282 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 PMS2P3Q13401 168 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 WDR88Q6ZMY6 472 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 DEF8Q6ZN54 512 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 UEVLDQ8IX04 471 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 MOGAT1Q96PD6 335 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 ALKBH3Q96Q83 286 aaPredicted RBP21.02■□□□□ 0.96
PFDN2-201ENST00000368010 LINC00470Q9BZP3 86 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 NPAP1Q9NZP6 1156 aa21.02■□□□□ 0.96
PFDN2-201ENST00000368010 LRRN3E7EW58 273 aa21.01■□□□□ 0.95
PFDN2-201ENST00000368010 NME4O00746 187 aa21.01■□□□□ 0.95
PFDN2-201ENST00000368010 NDUFAB1O14561 156 aa21.01■□□□□ 0.95
PFDN2-201ENST00000368010 PRDX6P30041 224 aa21.01■□□□□ 0.95
PFDN2-201ENST00000368010 TAS2R41P59536 307 aa21.01■□□□□ 0.95
PFDN2-201ENST00000368010 ADAM5Q6NVV9 412 aa21.01■□□□□ 0.95
PFDN2-201ENST00000368010 C8orf82Q6P1X6 216 aaPredicted RBP21.01■□□□□ 0.95
PFDN2-201ENST00000368010 ZNF611Q8N823 705 aa21.01■□□□□ 0.95
PFDN2-201ENST00000368010 SLC19A3Q9BZV2 496 aa21.01■□□□□ 0.95
PFDN2-201ENST00000368010 POLR2J2Q9GZM3 115 aaKnown RBP21.01■□□□□ 0.95
PFDN2-201ENST00000368010 POLR2J3Q9H1A7 115 aaKnown RBP21.01■□□□□ 0.95
PFDN2-201ENST00000368010 AMDHD2Q9Y303 409 aa21.01■□□□□ 0.95
PFDN2-201ENST00000368010 F8P00451 2351 aa21.01■□□□□ 0.95
PFDN2-201ENST00000368010 PRR14LQ5THK1 2151 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 A0A1W2PR80 420 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 TRAF3IP2O43734 574 aaPredicted RBP21■□□□□ 0.95
PFDN2-201ENST00000368010 SMPD2O60906 423 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 SLC43A1O75387 559 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 UPK3AO75631 287 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 CDH2P19022 906 aaPredicted RBP21■□□□□ 0.95
PFDN2-201ENST00000368010 OR1E2P47887 323 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 LGALS3BPQ08380 585 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 PUDPQ08623 228 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 C1QTNF12Q5T7M4 302 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 KLHL17Q6TDP4 642 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 TMEM108Q6UXF1 575 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 KBTBD8Q8NFY9 601 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 TPD52L3Q96J77 140 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 ZNF426Q9BUY5 554 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 ALG2Q9H553 416 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 SLC17A5Q9NRA2 495 aa21■□□□□ 0.95
PFDN2-201ENST00000368010 GMPR2Q9P2T1 348 aaKnown RBP21■□□□□ 0.95
PFDN2-201ENST00000368010 RAI1Q7Z5J4 1906 aaPredicted RBP21■□□□□ 0.95
PFDN2-201ENST00000368010 MS4A18H0YCH9 400 aa20.99■□□□□ 0.95
PFDN2-201ENST00000368010 KPNA4O00629 521 aaPredicted RBP20.99■□□□□ 0.95
PFDN2-201ENST00000368010 DYNC1I1O14576 645 aa20.99■□□□□ 0.95
PFDN2-201ENST00000368010 GSTA4O15217 222 aa20.99■□□□□ 0.95
PFDN2-201ENST00000368010 SHOX2O60902 331 aaPredicted RBP20.99■□□□□ 0.95
PFDN2-201ENST00000368010 ZNF432O94892 652 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms