RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PYDC2Q56P42 97 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 C6orf15Q6UXA7 325 aaPredicted RBP12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 SHFQ7M4L6 423 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 PLPP5Q8NEB5 264 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 OR10Z1Q8NGY1 313 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 LCORQ96JN0 433 aaPredicted RBP12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 UBQLN3Q9H347 655 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 MCCC2Q9HCC0 563 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 TXNL4BQ9NX01 149 aaKnown RBP12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 RPS6KB2Q9UBS0 482 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 SPIN1Q9Y657 262 aaPredicted RBP12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 IGHV3-20A0A0C4DH32 117 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 CCDC182A6NF36 153 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 FABP12A6NFH5 140 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 SPINK2P20155 84 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 RPS18P62269 152 aaKnown RBP12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 DBPQ10586 325 aaPredicted RBP12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 ZMYND11Q15326 602 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 NNATQ16517 81 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 ALG10BQ5I7T1 473 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 AADACL4Q5VUY2 407 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 SETD6Q8TBK2 473 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 FANK1Q8TC84 345 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 GRHL3Q8TE85 626 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 DNAJA4Q8WW22 397 aaPredicted RBP12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 ADIPOR1Q96A54 375 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 CCNL2Q96S94 520 aaPredicted RBP12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 OR8D2Q9GZM6 311 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 LIN7BQ9HAP6 207 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 C20orf141Q9NUB4 165 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 NDUFB11Q9NX14 153 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 GPN3Q9UHW5 284 aaPredicted RBP12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 TEKT2Q9UIF3 430 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 PADI1Q9ULC6 663 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 VSTM2BA6NLU5 285 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 C9J4A7 227 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 AKR7A2O43488 359 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 ADAM11O75078 769 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 ONECUT2O95948 504 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 HEXBP07686 556 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 YES1P07947 543 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 TSPAN19P0C672 248 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 SDC2P34741 201 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 MTNR1AP48039 350 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 GPR143P51810 404 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 GAS1P54826 345 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 SNRPD2P62316 118 aaKnown RBP12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 RPS25P62851 125 aaKnown RBP12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 SCN1BQ07699 218 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 C1DQ13901 141 aaKnown RBP12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 ZNF321PQ8N8H1 164 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 SLC7A6Q92536 515 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 CRB3Q9BUF7 120 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 FN3KQ9H479 309 aa12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 MEPEQ9NQ76 525 aaPredicted RBP12.64□□□□□ -0.39
CSNK1E-201ENST00000359867 HMX3A6NHT5 357 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 HCN1O60741 890 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 PTP4A3O75365 173 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 TCN2P20062 427 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 TBXA2RP21731 343 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 FOXC1Q12948 553 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 LNX2Q8N448 690 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 FAM71CQ8NEG0 241 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 RNFT2Q96EX2 444 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 GON7Q9BXV9 100 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 NXF5Q9H1B4 397 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 SLC26A1Q9H2B4 701 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 EXOSC3Q9NQT5 275 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 PLEKHB1Q9UF11 243 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 BAIAP2Q9UQB8 552 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 SIGLEC7Q9Y286 467 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 GPR52Q9Y2T5 361 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 PTRH2Q9Y3E5 179 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 C2orf92A0A1B0GVN3 265 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 OR6C76A6NM76 312 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 B4DXG7 233 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 BHLHE40O14503 412 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 NDUFA2O43678 99 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 KLF7O75840 302 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 PDGFAP04085 211 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 MYL9P24844 172 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 CD79BP40259 229 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 KIR2DL3P43628 341 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 CDH11P55287 796 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 FXYD6P3P58550 94 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 GLYR1Q49A26 553 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 FNDC7Q5VTL7 733 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 SMARCD3Q6STE5 483 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 CT55Q8WUE5 264 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 GATAD2BQ8WXI9 593 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 C8orf44Q96CB5 159 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 C1GALT1C1Q96EU7 318 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 NUDT9Q9BW91 350 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 SLC22A4Q9H015 551 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 GLTPQ9NZD2 209 aa12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 H2AFY2Q9P0M6 372 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 EXOSC1Q9Y3B2 195 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-201ENST00000359867 TO15178 435 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 CH25HO95992 272 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 SAGP10523 405 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms