RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 PCGF1Q9BSM1 259 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 BBS2Q9BXC9 721 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 UQCC1Q9NVA1 299 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 RASD1Q9Y272 281 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 HDGFL3Q9Y3E1 203 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 TNRC6AQ8NDV7 1962 aaKnown RBP4.13□□□□□ -1.75
PTPN22-201ENST00000359785 ARL5CA6NH57 179 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 ELOA3DA6NLF2 546 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-201ENST00000359785 DVL1O14640 695 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 HOXA2O43364 376 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 SCO1O75880 301 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 CXCL10P02778 98 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 AKAIN1P0CW23 69 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 TXNP10599 105 aaKnown RBP4.13□□□□□ -1.75
PTPN22-201ENST00000359785 ZNF3P17036 446 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 CERS1P27544 350 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 GPX4P36969 197 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-201ENST00000359785 CDH11P55287 796 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 NXPE4Q6UWF7 544 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 CMTM4Q8IZR5 234 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 TCEANCQ8N8B7 351 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 ZNF565Q8N9K5 539 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 UBAC2Q8NBM4 344 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 OR51G2Q8NGK0 314 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 STT3BQ8TCJ2 826 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 TMEM40Q8WWA1 233 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 FCAMRQ8WWV6 532 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 COX14Q96I36 57 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 ZNF514Q96K75 400 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-201ENST00000359785 WDR92Q96MX6 357 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 S100A13Q99584 98 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 AP5M1Q9H0R1 490 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 SLC7A11Q9UPY5 501 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 SIGLEC7Q9Y286 467 aa4.13□□□□□ -1.75
PTPN22-201ENST00000359785 NOTCH4Q99466 2003 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 KIR2DL5BA0A0G2JN68 375 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 KIR2DL5BA0A0G2JPC4 375 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 TVP23AA6NH52 213 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 AP4M1O00189 453 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 WWP2O00308 870 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 ZNF264O43296 627 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 CTSVO60911 334 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 DIRAS1O95057 198 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 DUS4LO95620 317 aaKnown RBP4.12□□□□□ -1.75
PTPN22-201ENST00000359785 WNT11O96014 354 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 RLN2P04090 185 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 ATP1B2P14415 290 aaPredicted RBP4.12□□□□□ -1.75
PTPN22-201ENST00000359785 ABCD3P28288 659 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 AHRP35869 848 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 ARL1P40616 181 aaPredicted RBP4.12□□□□□ -1.75
PTPN22-201ENST00000359785 PKIAP61925 76 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 SNRPD2P62316 118 aaKnown RBP4.12□□□□□ -1.75
PTPN22-201ENST00000359785 RAC1P63000 192 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 LINC00303Q3SY05 128 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 ENPP7Q6UWV6 458 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 CD163Q86VB7 1156 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 KIR2DL5AQ8N109 375 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 OR6J1Q8NGC5 347 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 OR6P1Q8NGX9 317 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 RXFP4Q8TDU9 374 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 RGP1Q92546 391 aaPredicted RBP4.12□□□□□ -1.75
PTPN22-201ENST00000359785 ASB16Q96NS5 453 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 PKP4Q99569 1192 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 TCF25Q9BQ70 676 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 LMF2Q9BU23 707 aaKnown RBP4.12□□□□□ -1.75
PTPN22-201ENST00000359785 SLC5A7Q9GZV3 580 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 MFFQ9GZY8 342 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 FKRPQ9H9S5 495 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 CDH20Q9HBT6 801 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 OR5AC2Q9NZP5 309 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 DNAJC27Q9NZQ0 273 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 PTGFRNQ9P2B2 879 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 CFAP97Q9P2B7 532 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 CLCA2Q9UQC9 943 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 STRAPQ9Y3F4 350 aaKnown RBP4.12□□□□□ -1.75
PTPN22-201ENST00000359785 CLCA3PQ9Y6N3 262 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 TRAV19A0A0A6YYK7 116 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 C9JVG2 144 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 F5H5T6 163 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 J3KTA2 159 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 EIF1AYO14602 144 aaKnown RBP4.12□□□□□ -1.75
PTPN22-201ENST00000359785 PIN1P1O15428 100 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 FLRT2O43155 660 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 NME6O75414 186 aaPredicted RBP4.12□□□□□ -1.75
PTPN22-201ENST00000359785 UPK3AO75631 287 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 C1orf105O95561 183 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 F7P08709 466 aaPredicted RBP4.12□□□□□ -1.75
PTPN22-201ENST00000359785 OR5AC1P0C628 307 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 SEC11BP0C7V7 166 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 MMP9P14780 707 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 ITGA3P26006 1051 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 EIF1AXP47813 144 aaKnown RBP4.12□□□□□ -1.75
PTPN22-201ENST00000359785 TAS2R20P59543 309 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 RAB2AP61019 212 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 RAP1BP61224 184 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 LAPTM4AQ15012 233 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 TMEM241Q24JQ0 296 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 PLPP4Q5VZY2 271 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 ZNF852Q6ZMS4 543 aa4.12□□□□□ -1.75
PTPN22-201ENST00000359785 Q6ZS49 121 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms