RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RBM24Q9BX46 236 aaKnown RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 METTL9Q9H1A3 318 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 GMEB2Q9UKD1 530 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 PRAMEF27A3QJZ7 478 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 SNRPGP15A8MWD9 76 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 H7C1Q1 480 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 AKR7A2O43488 359 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR13C7P0DN81 318 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 ATP1B3P54709 279 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 SFRP5Q5T4F7 317 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 PRAMEF9Q5VWM5 478 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 Q6ZTK2 550 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 MRPL10Q7Z7H8 261 aaKnown RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 NLGN4XQ8N0W4 816 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZNF75AQ96N20 296 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 HLA-DOBP13765 273 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 HIST1H1TP22492 207 aaPredicted RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 KCNJ10P78508 379 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 LTB4RQ15722 352 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 ADIRFQ15847 76 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 B3GNT9Q6UX72 402 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 DLEU7Q6UYE1 221 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 ADGRE4PQ86SQ3 457 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 NKAIN3Q8N8D7 197 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 UBE2FQ969M7 185 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 FAM3DQ96BQ1 224 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 CHRDQ9H2X0 955 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 RNF167Q9H6Y7 350 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 CXXC1Q9P0U4 656 aaPredicted RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 SOCS6O14544 535 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 NUDT21O43809 227 aaKnown RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 JTBO76095 146 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 APOA2P02652 100 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 GRASPQ7Z6J2 395 aaPredicted RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZNF100Q8IYN0 542 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 FAM58AQ8N1B3 248 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR13C9Q8NGT0 318 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 ANKRD9Q96BM1 317 aaPredicted RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 RAB22AQ9UL26 194 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 A0A1W2PP55 124 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 TMEM72A0PK05 275 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 M0QYG6 137 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 M0QZQ0 153 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 OMGP23515 440 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 PSMB3P49720 205 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 UBE2IP63279 158 aaKnown RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 FOXK2Q01167 660 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 RBM39Q14498 530 aaKnown RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 TAF9Q16594 264 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 CCNJQ5T5M9 372 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 ATPAF1Q5TC12 328 aaPredicted RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR51S1Q8NGJ8 323 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 PPP1R35Q8TAP8 253 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 WDR76Q9H967 626 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 MUTYHQ9UIF7 546 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 ENTPD2Q9Y5L3 495 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 A0A1B0GUH1 482 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 A0A1W2PQU0 124 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 MGMTP16455 207 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 CD70P32970 193 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 MRPL2Q5T653 305 aaKnown RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 C15orf54Q8N8G6 183 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 THAP3Q8WTV1 239 aaPredicted RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZNF480Q8WV37 535 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 NEURL3Q96EH8 262 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 SGIP1Q9BQI5 828 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 SCPEP1Q9HB40 452 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 CCDC85CA6NKD9 419 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 FURINP09958 794 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 CSNK1DP48730 415 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 CHRNEQ04844 493 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 MED1Q15648 1581 aaPredicted RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 MRPL21Q7Z2W9 205 aaKnown RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 WDR5BQ86VZ2 330 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 HSD17B11Q8NBQ5 300 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 C20orf24Q9BUV8 137 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 INSL6Q9Y581 213 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 URGCP-MRPS24S4R325 110 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 PHRF1Q9P1Y6 1649 aaKnown RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 BAZ2AQ9UIF9 1905 aaKnown RBP11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 UMAD1C9J7I0 102 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 C1orf105O95561 183 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 LPLP06858 475 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 EVX1P49640 407 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 XKR7Q5GH72 579 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 SLC35D3Q5M8T2 416 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 WDR88Q6ZMY6 472 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 SLC22A24Q8N4F4 322 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR1J2Q8NGS2 313 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 GPR62Q9BZJ7 368 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 TXNRD2Q9NNW7 524 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 PLSCR3Q9NRY6 295 aa11.81□□□□□ -0.52
SYNCRIP-201ENST00000355238 ARRB1P49407 418 aaPredicted RBP11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 FAM26EQ8N5C1 309 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 DVL3Q92997 716 aaPredicted RBP11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 ISG20Q96AZ6 181 aaKnown RBP11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZCCHC4Q9H5U6 513 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 VSX1Q9NZR4 365 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms