RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 FGBP02675 491 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 FAM157CP0CG43 387 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 CLUP10909 449 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 NME2P22392 152 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 ITPKBP27987 946 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 PMELP40967 661 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 RPS11P62280 158 aaKnown RBP eCLIP12.17□□□□□ -0.46
IFT88-202ENST00000351808 MEF2AQ02078 507 aaPredicted RBP12.17□□□□□ -0.46
IFT88-202ENST00000351808 MRPL58Q14197 206 aaKnown RBP12.17□□□□□ -0.46
IFT88-202ENST00000351808 ZNF697Q5TEC3 545 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 MED27Q6P2C8 311 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 DHRS11Q6UWP2 260 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 ENPP7Q6UWV6 458 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 PPP1R3BQ86XI6 285 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 LMNTD1Q8N9Z9 388 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 OR5M8Q8NGP6 311 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 HAVCR1Q96D42 359 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 PIK3IP1Q96FE7 263 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 SMOC1Q9H4F8 434 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 LHX9Q9NQ69 397 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 GAR1Q9NY12 217 aaKnown RBP12.17□□□□□ -0.46
IFT88-202ENST00000351808 CACFD1Q9UGQ2 172 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 PLXND1Q9Y4D7 1925 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 PLXNA3P51805 1871 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 ACOD1A6NK06 481 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 CDC42EP2O14613 210 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 CD160O95971 181 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 ARG1P05089 322 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 RHOCP08134 193 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 GTF2F2P13984 249 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 NDUFV2P19404 249 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 AQP2P41181 271 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 CAV2P51636 162 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 RAB4BP61018 213 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 ARF5P84085 180 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 GUCA2AQ02747 115 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 CXCL9Q07325 125 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 RSU1Q15404 277 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 FNDC3BQ53EP0 1204 aaKnown RBP12.17□□□□□ -0.46
IFT88-202ENST00000351808 PRPF38BQ5VTL8 546 aaKnown RBP12.17□□□□□ -0.46
IFT88-202ENST00000351808 BAP18Q8IXM2 172 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 ZNF511Q8NB15 262 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 RGP1Q92546 391 aaPredicted RBP12.17□□□□□ -0.46
IFT88-202ENST00000351808 TAAR9Q96RI9 348 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 C20orf24Q9BUV8 137 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 MRPL37Q9BZE1 423 aaKnown RBP12.17□□□□□ -0.46
IFT88-202ENST00000351808 FCF1Q9Y324 198 aaKnown RBP12.17□□□□□ -0.46
IFT88-202ENST00000351808 COL4A5P29400 1685 aa12.17□□□□□ -0.46
IFT88-202ENST00000351808 DNAJC25-GNG10A0A024R161 153 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 A0A0B4J2A0 478 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 C7orf77A4D0Y5 90 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 H7C417 338 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 PIN1P1O15428 100 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 MOSPD3O75425 235 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 IGSF6O95976 241 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 HCKP08631 526 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 CLTBP09497 229 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 TPT1P13693 172 aaKnown RBP12.16□□□□□ -0.46
IFT88-202ENST00000351808 PGAM2P15259 253 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 FUT1P19526 365 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 CDX1P47902 265 aaPredicted RBP12.16□□□□□ -0.46
IFT88-202ENST00000351808 ACY1Q03154 408 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 LIPNQ5VXI9 398 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 SAMD7Q7Z3H4 446 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 C19orf43Q9BQ61 176 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 MTFP1Q9UDX5 166 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 SHPKQ9UHJ6 478 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 OR10H2O60403 315 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 ADAMTS4O75173 837 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 PMS2P2O95744 297 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 SBK2P0C263 348 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 NDUFA6P56556 154 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 LSM6P62312 80 aaKnown RBP12.16□□□□□ -0.46
IFT88-202ENST00000351808 KIAA0141Q14154 515 aaPredicted RBP12.16□□□□□ -0.46
IFT88-202ENST00000351808 VWA2Q5GFL6 755 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 C16orf59Q7L2K0 433 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 SULT4A1Q9BR01 284 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 FN3KRPQ9HA64 309 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 PARPBPQ9NWS1 579 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 ZDHHC3Q9NYG2 299 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 P2RX2Q9UBL9 471 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 GPR55Q9Y2T6 319 aaPredicted RBP12.16□□□□□ -0.46
IFT88-202ENST00000351808 A0A0C4DFX4 3053 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 A0A1B0GTI1 187 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 ADM5C9JUS6 153 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 H3BNC9 293 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 PPM1DO15297 605 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 MTX2O75431 263 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 CD3DP04234 171 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 RAB40ALP0C0E4 278 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 GSK3AP49840 483 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 DHCR24Q15392 516 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 AWAT1Q58HT5 328 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 NSUN5P2Q63ZY6 315 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 RFLNAQ6ZTI6 216 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 GPBAR1Q8TDU6 330 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 NUDCD2Q8WVJ2 157 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 RAB40AQ8WXH6 277 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 F2RL3Q96RI0 385 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 MICU1Q9BPX6 476 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms