RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 PXKQ7Z7A4 578 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 EXD3Q8N9H8 876 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 GHSRQ92847 366 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 ALG12Q9BV10 488 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 PPIL3Q9H2H8 161 aaKnown RBP18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 APMAPQ9HDC9 416 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 RPRD1BQ9NQG5 326 aaKnown RBP18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 PPIEQ9UNP9 301 aaKnown RBP18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 MOKQ9UQ07 419 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 GRIP1Q9Y3R0 1128 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 NPFFR2Q9Y5X5 522 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 WDFY3Q8IZQ1 3526 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 SHC1P29353 583 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 PEAR1Q5VY43 1037 aaPredicted RBP18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 ZNF385CQ66K41 422 aaPredicted RBP18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 CCBE1Q6UXH8 406 aaPredicted RBP18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 CEACAM19Q7Z692 300 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 TPRA1Q86W33 373 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 NR2C2APQ86WQ0 139 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 METTL21AQ8WXB1 218 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 ACOT12Q8WYK0 555 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 SOSTQ9BQB4 213 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 TTTY10Q9BZA0 68 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 NCDNQ9UBB6 729 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 GRHPRQ9UBQ7 328 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 COPS3Q9UNS2 423 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 ZDBF2Q9HCK1 2354 aa18.49■□□□□ 0.55
CHRNA3-202ENST00000348639 VSTM2BA6NLU5 285 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 HPGDSO60760 199 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 TMCC2O75069 709 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 POLR2HP52434 150 aaKnown RBP18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 SIRPAP78324 504 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 EFR3AQ14156 821 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 CDK5R1Q15078 307 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 TRIM61Q5EBN2 209 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 GPR139Q6DWJ6 353 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 POMZP3Q6PJE2 187 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 METAP1DQ6UB28 335 aaPredicted RBP18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 MISPQ8IVT2 679 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 TEX19Q8NA77 164 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 NUBPLQ8TB37 319 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 GPR119Q8TDV5 335 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 SMIM19Q96E16 107 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 NECAB3Q96P71 396 aaPredicted RBP18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 GTPBP2Q9BX10 602 aaKnown RBP18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 MARCH7Q9H992 704 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 PCDHGB2Q9Y5G2 931 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 CFAP54Q96N23 3096 aa18.48■□□□□ 0.55
CHRNA3-202ENST00000348639 C4orf47A7E2U8 309 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 ADAM10O14672 748 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 MAGEB4O15481 346 aaPredicted RBP18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 SLC25A12O75746 678 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 CD1AP06126 327 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 SLC26A5P58743 744 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 QPRTQ15274 297 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 CCDC58Q4VC31 144 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 ACSM3Q53FZ2 586 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 PPP1R3BQ86XI6 285 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 DUSP19Q8WTR2 217 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 THAP3Q8WTV1 239 aaPredicted RBP18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 TSPAN32Q96QS1 320 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 CTRCQ99895 268 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 CPNE3O75131 537 aaKnown RBP18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 MT-ATP6P00846 226 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 SERPINA3P01011 423 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 MYL9P24844 172 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 EVX1P49640 407 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 EMP2P54851 167 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 SCN1BQ07699 218 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 FAM27D1Q5T7N8 215 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 HBMQ6B0K9 141 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 RPL22L1Q6P5R6 122 aaKnown RBP18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 CNIH2Q6PI25 160 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 C16orf47Q6ZP98 133 aaPredicted RBP18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 GFM1Q96RP9 751 aaKnown RBP18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 OCIAD1Q9NX40 245 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 GNG8Q9UK08 70 aa18.47■□□□□ 0.55
CHRNA3-202ENST00000348639 TMED7-TICAM2A0A0A6YYA0 188 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 A0A1W2PQ09 198 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 SEC14L5O43304 696 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 SUSD5O60279 629 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 NPIPB7O75200 414 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 PTBP1P26599 531 aaKnown RBP eCLIP18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 LPAL2Q16609 132 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 PYDC2Q56P42 97 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 MESTQ5EB52 335 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 C1QL3Q5VWW1 255 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 PAPD4Q6PIY7 484 aaKnown RBP18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 LYPD4Q6UWN0 246 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 PAMR1Q6UXH9 720 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 MAMDC2Q7Z304 686 aaPredicted RBP18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 GRINAQ7Z429 371 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 ADGRG3Q86Y34 549 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 THAP4Q8WY91 577 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 TSSK2Q96PF2 358 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 PTDSS2Q9BVG9 487 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 RXFP3Q9NSD7 469 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 TAS2R10Q9NYW0 307 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 ADAM30Q9UKF2 790 aa18.46■□□□□ 0.55
CHRNA3-202ENST00000348639 TMED7Q9Y3B3 224 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms