RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ZNF619Q8N2I2 560 aa10.34□□□□□ -0.75
SMARCE1-202ENST00000348513 CLDN22Q8N7P3 220 aa10.34□□□□□ -0.75
SMARCE1-202ENST00000348513 BVESQ8NE79 360 aa10.34□□□□□ -0.75
SMARCE1-202ENST00000348513 ZNF845Q96IR2 970 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-202ENST00000348513 PITX2Q99697 317 aa10.34□□□□□ -0.75
SMARCE1-202ENST00000348513 NIPSNAP3BQ9BS92 247 aa10.34□□□□□ -0.75
SMARCE1-202ENST00000348513 SLC12A9Q9BXP2 914 aa10.34□□□□□ -0.75
SMARCE1-202ENST00000348513 TM7SF3Q9NS93 570 aa10.34□□□□□ -0.75
SMARCE1-202ENST00000348513 URGCP-MRPS24S4R325 110 aa10.34□□□□□ -0.75
SMARCE1-202ENST00000348513 A0A1W2PPQ1 181 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 A8MXE2 369 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 UMAD1C9J7I0 102 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 EN2P19622 333 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 DRD1P21728 446 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 DLX2Q07687 328 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 MGAT3Q09327 533 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 ALG10Q5BKT4 473 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 ALG10BQ5I7T1 473 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 LEG1Q6P5S2 330 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 PIANPQ8IYJ0 282 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 STPG2Q8N412 459 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 ZNF439Q8NDP4 499 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 OR6K3Q8NGY3 331 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 ALOXE3Q9BYJ1 711 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 CHRDQ9H2X0 955 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 C5P01031 1676 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 C17orf113A0A1B0GUU1 675 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 LDB3O75112 727 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 C21orf58P58505 322 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 MRPL49Q13405 166 aaKnown RBP10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 OR5I1Q13606 314 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 ARL6IP1Q15041 203 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 PLAG1Q6DJT9 500 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 COMMD1Q8N668 190 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 PROKR1Q8TCW9 393 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 BRIX1Q8TDN6 353 aaKnown RBP10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 ALG8Q9BVK2 526 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 ALX4Q9H161 411 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 PCED1AQ9H1Q7 454 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 RXFP3Q9NSD7 469 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 ZNF226Q9NYT6 803 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 KDM3BQ7LBC6 1761 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 LOC390937A0A1W2PQ73 354 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 H3BML4 177 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 MAS1P04201 325 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 PCK2Q16822 640 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 OR51D1Q8NGF3 324 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 OR51L1Q8NGJ5 315 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 ZIC5Q96T25 663 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 GDF2Q9UK05 429 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 OPN1LWP04000 364 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 KCNJ3P48549 501 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 POU3F4P49335 361 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 FOXK1P85037 733 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 KCTD18Q6PI47 426 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 NETO1Q8TDF5 533 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 ST6GAL2Q96JF0 529 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 TMEM231Q9H6L2 316 aa10.33□□□□□ -0.76
SMARCE1-202ENST00000348513 NME4O00746 187 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 AMY2AP04746 511 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 CD3GP09693 182 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 CRISP1P54107 249 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 TMPRSS12Q86WS5 348 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 GPR137CQ8N3F9 429 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 MRPL43Q8N983 215 aaKnown RBP10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 NEIL2Q969S2 332 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 ENY2Q9NPA8 101 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 SLC22A7Q9Y694 548 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 TRBV2A0A0J9YWF9 115 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 G3V2L1 256 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 PVRP15151 417 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 ITGB7P26010 798 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 ITGB8P26012 769 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 PSMB5P28074 263 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 IFITM2Q01629 132 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 GPR50Q13585 617 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 CST9LP1Q5W188 147 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 ZNF836Q6ZNA1 936 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 NRMQ8IXM6 262 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 ACVR1CQ8NER5 493 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 UCN3Q969E3 161 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 NAA11Q9BSU3 229 aaPredicted RBP10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 PADI1Q9ULC6 663 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 OR2A25A4D2G3 310 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 M0R3H8 397 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 FRS3O43559 492 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 TIMP2P16035 220 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 TM4SF4P48230 202 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 SUOXP51687 545 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 CTSCP53634 463 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 CDKN3Q16667 212 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 COL5A1-AS1Q5SY13 56 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 CST9Q5W186 159 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 PLBD1Q6P4A8 553 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 OVCH2Q7RTZ1 564 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 RNF175Q8N4F7 328 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 OR52N2Q8NGI0 321 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 OR52E1Q8NGJ3 308 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 LPAR4Q99677 370 aa10.32□□□□□ -0.76
SMARCE1-202ENST00000348513 SLC7A11Q9UPY5 501 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms