RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 HCRTR2O43614 444 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 IL33O95760 270 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 NUDT14O95848 222 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 YES1P07947 543 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 OR8G3PP0DMU2 310 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 SRFP11831 508 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 ITPKBP27987 946 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 TACR3P29371 465 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 NUDT1P36639 197 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 CSNK1EP49674 416 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 NANOS3P60323 173 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 DGCR2P98153 550 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 EGR4Q05215 589 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 LTBQ06643 244 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 VWA2Q5GFL6 755 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 CEP78Q5JTW2 689 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 C6orf183Q5T699 404 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 HES5Q5TA89 166 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 COL13A1Q5TAT6 717 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 BCL2L15Q5TBC7 163 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 FNDC7Q5VTL7 733 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 ASCC1Q8N9N2 400 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 LGALS14Q8TCE9 139 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 LRFN5Q96NI6 719 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 NMNAT2Q9BZQ4 307 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 RXFP3Q9NSD7 469 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 KLHDC2Q9Y2U9 406 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 RNF215Q9Y6U7 377 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 UNC13CQ8NB66 2214 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 DCTN6O00399 190 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 RGS13O14921 159 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 GLCEO94923 617 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 UCHL1P09936 223 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 PNMTP11086 282 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 AHCYP23526 432 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 RORAP35398 523 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 EFNA3P52797 238 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 LINC01590Q5TEZ4 76 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 PYHIN1Q6K0P9 492 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 PRSS45Q7RTY3 260 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 FAM71CQ8NEG0 241 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 ZDHHC12Q96GR4 267 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 LPAR4Q99677 370 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 FOXQ1Q9C009 403 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 TSPAN10Q9H1Z9 355 aaPredicted RBP13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 MMP25Q9NPA2 562 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 CACNG2Q9Y698 323 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 TRAV1-2A0A0B4J238 106 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 GPANK1O95872 356 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 CD14P08571 375 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 SLC6A1P30531 599 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 PPICP45877 212 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 CAPZA2P47755 286 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 TOMM34Q15785 309 aaPredicted RBP13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 NTRK2Q16620 822 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 Q5BKY6 102 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 OR7G1Q8NGA0 311 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 PELOQ9BRX2 385 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 NUDT15Q9NV35 164 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 NPFFR2Q9Y5X5 522 aa13.56□□□□□ -0.24
VIPAS39-202ENST00000343765 ANKRD61A6NGH8 418 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 SLC43A1O75387 559 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 WISP1O95388 367 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 ADRB1P08588 477 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 EVI2BP34910 448 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 NR0B1P51843 470 aaKnown RBP13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 CLDN12P56749 244 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 RPL18Q07020 188 aaKnown RBP13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 C14orf28Q4W4Y0 310 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 SLC35D3Q5M8T2 416 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 SHISA6Q6ZSJ9 500 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 NANOGNBQ7Z5D8 188 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 MARCH3Q86UD3 253 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 TEX19Q8NA77 164 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 GCDHQ92947 438 aaPredicted RBP13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 LCORQ96JN0 433 aaPredicted RBP13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 SLC46A1Q96NT5 459 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 SLC19A3Q9BZV2 496 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 HIF3AQ9Y2N7 669 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 ARID1BQ8NFD5 2236 aaPredicted RBP13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 FITM1A5D6W6 292 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 FAM47E-STBD1D6RA91 191 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 PIN1P1O15428 100 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 ZFPL1O95159 310 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 IL12BP29460 328 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 BTCP35070 178 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 ZNF117Q03924 483 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 EFR3AQ14156 821 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 ODF4Q2M2E3 257 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 CCDC92Q53HC0 331 aaPredicted RBP13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 C1QL3Q5VWW1 255 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 FAM122BQ7Z309 247 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 CEP76Q8TAP6 659 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 CREB3L1Q96BA8 519 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 FOXN4Q96NZ1 517 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 NUDT9Q9BW91 350 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 UCK1Q9HA47 277 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 GRHPRQ9UBQ7 328 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 CACNA1CQ13936 2221 aa13.55□□□□□ -0.24
VIPAS39-202ENST00000343765 A0A1B0GTH9 108 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms