RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 HCKP08631 526 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 UCHL1P09936 223 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 ACP5P13686 325 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 COX7A2P14406 83 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 EPB42P16452 691 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 MC4RP32245 332 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 PTGER3P43115 390 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 TTPAP49638 278 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 LUMP51884 338 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-202ENST00000339438 HCCSP53701 268 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 MEF2AQ02078 507 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-202ENST00000339438 NFATC2Q13469 925 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 OR52W1Q6IF63 320 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 PODNL1Q6PEZ8 512 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF613Q6PF04 617 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SLC36A4Q6YBV0 504 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 LRRTM4Q86VH4 590 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 CMTM4Q8IZR5 234 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SPAG16Q8N0X2 631 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 KISS1RQ969F8 398 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SLAMF9Q96A28 289 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 ZFP3Q96NJ6 502 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 NRIP2Q9BQI9 281 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 TRIM62Q9BVG3 475 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 BOCQ9BWV1 1114 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 NPFFR2Q9Y5X5 522 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 RALGAPA1Q6GYQ0 2036 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 A0A1W2PRQ8 180 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 ANKRD61A6NGH8 418 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 PRRT4C9JH25 899 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 F5H5P2 479 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 F8VVB4 439 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 F8VWA3 439 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 BCL2L11O43521 198 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 ITGA10O75578 1167 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 HOXB5P09067 269 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 NQO2P16083 231 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 HOXA5P20719 270 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 PPIBP23284 216 aaKnown RBP5.12□□□□□ -1.59
CSDE1-202ENST00000339438 AOAHP28039 575 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 NRG3P56975 720 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 RPS11P62280 158 aaKnown RBP eCLIP5.12□□□□□ -1.59
CSDE1-202ENST00000339438 BLOC1S1P78537 153 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 PITPNAQ00169 270 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 CDK6Q00534 326 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SORDQ00796 357 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SERINC3Q13530 473 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 GFOD2Q3B7J2 385 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 TMEM244Q5VVB8 128 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SYT9Q86SS6 491 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 TGIF2LXQ8IUE1 241 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 GLB1L2Q8IW92 636 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SDR9C7Q8NEX9 313 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SNX33Q8WV41 574 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 TGM7Q96PF1 710 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 MGME1Q9BQP7 344 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 CIPCQ9C0C6 399 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 FCF1Q9Y324 198 aaKnown RBP5.12□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF337Q9Y3M9 751 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 TIMM10BQ9Y5J6 103 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 PRAMEF27A3QJZ7 478 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 NAP1L6A6NFF2 107 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 RHPN2P1A8MT19 583 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 GABARAPH6UMI1 98 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SURF4O15260 269 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 B4GALT2O60909 372 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 CD74P04233 296 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 IFNW1P05000 195 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 CD5P06127 495 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 GNSP15586 552 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 DCTDP32321 178 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 CRATP43155 626 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 NUTF2P61970 127 aaKnown RBP5.12□□□□□ -1.59
CSDE1-202ENST00000339438 PPP2CBP62714 309 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 PPP2CAP67775 309 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 PDE7AQ13946 482 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SMCO1Q147U7 214 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 PPA1Q15181 289 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 DHCR24Q15392 516 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 RPS26P11Q5JNZ5 115 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-202ENST00000339438 DNLZQ5SXM8 178 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 ZCCHC12Q6PEW1 402 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 LSRQ86X29 649 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-202ENST00000339438 C1QL4Q86Z23 238 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 OR4Q3Q8NH05 313 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 BBS10Q8TAM1 723 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SMAP2Q8WU79 429 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SMARCD2Q92925 531 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SCRT1Q9BWW7 348 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SLC32A1Q9H598 525 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 TUBA4BQ9H853 241 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 PARD6AQ9NPB6 346 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 LHX9Q9NQ69 397 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 KLHL1Q9NR64 748 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 TDP1Q9NUW8 608 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 NFKBIL1Q9UBC1 381 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-202ENST00000339438 CACFD1Q9UGQ2 172 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 FBXO4Q9UKT5 387 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 AP4M1O00189 453 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CHST10O43529 356 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms