RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 LRRTM2O43300 516 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 VAMP5O95183 116 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 RCBTB2O95199 551 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 TSPAN19P0C672 248 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 ADORA3P0DMS8 318 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 GSSP48637 474 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 PUDPQ08623 228 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 TSPAN31Q12999 210 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 FHL1Q13642 323 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 SLC17A1Q14916 467 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 RNPS1Q15287 305 aaKnown RBP19.76■□□□□ 0.75
SDC3-202ENST00000339394 GCNT2Q8N0V5 402 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 GTPBP3Q969Y2 492 aaKnown RBP19.76■□□□□ 0.75
SDC3-202ENST00000339394 TNFRSF13CQ96RJ3 184 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 NIPSNAP1Q9BPW8 284 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 KLHL9Q9P2J3 617 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 B3GAT1Q9P2W7 334 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 CLEC4AQ9UMR7 237 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 MGAT4BQ9UQ53 548 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 RASD1Q9Y272 281 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 HIF3AQ9Y2N7 669 aa19.76■□□□□ 0.75
SDC3-202ENST00000339394 A0A1B0GUH1 482 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 ZNF716A6NP11 495 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 PYCARD-AS1I3L0S3 204 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 OR6A2O95222 327 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 IL2RAP01589 272 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 ANPEPP15144 967 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 AHCYP23526 432 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 PER3P56645 1201 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 RPS4XP62701 263 aaKnown RBP19.75■□□□□ 0.75
SDC3-202ENST00000339394 TMEM211Q6ICI0 200 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 OR2A2Q6IF42 318 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 STK32CQ86UX6 486 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 MCEMP1Q8IX19 187 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 SVOPLQ8N434 492 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 INTS12Q96CB8 462 aaKnown RBP19.75■□□□□ 0.75
SDC3-202ENST00000339394 SF3B5Q9BWJ5 86 aaKnown RBP19.75■□□□□ 0.75
SDC3-202ENST00000339394 DGCR6LQ9BY27 220 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 DCLRE1BQ9H816 532 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 SIGLEC7Q9Y286 467 aa19.75■□□□□ 0.75
SDC3-202ENST00000339394 RRP15Q9Y3B9 282 aaKnown RBP19.75■□□□□ 0.75
SDC3-202ENST00000339394 UNC119BA6NIH7 251 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 SAC3D1A6NKF1 404 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 HPRP00739 348 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 PLGP00747 810 aaPredicted RBP19.74■□□□□ 0.75
SDC3-202ENST00000339394 UQCRC1P31930 480 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 CEACAM8P31997 349 aaPredicted RBP19.74■□□□□ 0.75
SDC3-202ENST00000339394 AQP2P41181 271 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 RPL18Q07020 188 aaKnown RBP19.74■□□□□ 0.75
SDC3-202ENST00000339394 PDK3Q15120 406 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 ZBED5Q49AG3 693 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 C4orf17Q53FE4 359 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 TUSC5Q8IXB3 177 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 NAXEQ8NCW5 288 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 ZNF775Q96BV0 537 aaPredicted RBP19.74■□□□□ 0.75
SDC3-202ENST00000339394 GMPPAQ96IJ6 420 aaPredicted RBP19.74■□□□□ 0.75
SDC3-202ENST00000339394 BCO1Q9HAY6 547 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 FANCFQ9NPI8 374 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 MPDZO75970 2070 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 LOC102725191A0A1B0GVB3 256 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 A0A1W2PNV4 684 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 C11orf98E9PRG8 122 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 PDLIM1O00151 329 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 RNF13O43567 381 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 PTP4A3O75365 173 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 ANXA8P13928 327 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 SLC16A1P53985 500 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 IL1RL1Q01638 556 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 ZP4Q12836 540 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 POU4F3Q15319 338 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 ANKDD1AQ495B1 522 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 RIPPLY2Q5TAB7 128 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 ANKRD34AQ69YU3 496 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 PXKQ7Z7A4 578 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 EPHX4Q8IUS5 362 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 ATG16L2Q8NAA4 619 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 MOSPD2Q8NHP6 518 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 OXGR1Q96P68 337 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 GLRX2Q9NS18 164 aa19.74■□□□□ 0.75
SDC3-202ENST00000339394 STX18Q9P2W9 335 aaKnown RBP19.74■□□□□ 0.75
SDC3-202ENST00000339394 IGKV3D-15A0A087WSY6 115 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 ADAP00813 363 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 YES1P07947 543 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 HLA-DOBP13765 273 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 FOXF2Q12947 444 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 GUSBP1Q15486 140 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 OR9K2Q8NGE7 335 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 RND1Q92730 232 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 SDCCAG3Q96C92 435 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 ZFP3Q96NJ6 502 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 CIB1Q99828 191 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 MCCC2Q9HCC0 563 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 GP6Q9HCN6 339 aa19.73■□□□□ 0.75
SDC3-202ENST00000339394 KIAA1549Q9HCM3 1950 aa19.72■□□□□ 0.75
SDC3-202ENST00000339394 A0A0G2JNJ9 132 aa19.72■□□□□ 0.75
SDC3-202ENST00000339394 PLA2G2AP14555 144 aa19.72■□□□□ 0.75
SDC3-202ENST00000339394 ZNF26P17031 533 aaPredicted RBP19.72■□□□□ 0.75
SDC3-202ENST00000339394 ZNF43P17038 809 aa19.72■□□□□ 0.75
SDC3-202ENST00000339394 DAPP51397 102 aa19.72■□□□□ 0.75
SDC3-202ENST00000339394 FXYD6P3P58550 94 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms