RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 B4GALNT2Q8NHY0 566 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 ASB17Q8WXJ9 295 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 MCHR2Q969V1 340 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 GTPBP3Q969Y2 492 aaKnown RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 MIB2Q96AX9 1013 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 ERLEC1Q96DZ1 483 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 RASL10BQ96S79 203 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 PPP1R3EQ9H7J1 279 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 TBC1D23Q9NUY8 699 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 B3GALT5Q9Y2C3 310 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 DNAJC13O75165 2243 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 A6NIZ1 184 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 LRRC3CA6NJW4 275 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 AQP7P3A6NL99 342 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 MCIDASD6RGH6 385 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SCDO00767 359 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 CSTAP01040 98 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 PSKH1P11801 424 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 IMPDH2P12268 514 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 LIFP15018 202 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SPI1P17947 270 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 CASP3P42574 277 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 RFX3P48380 749 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 RAP1BP61224 184 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 RPS3AP61247 264 aaKnown RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 RAP1AP62834 184 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 FOXK1P85037 733 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF846Q147U1 533 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 ARHGAP40Q5TG30 622 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 TMEM236Q5W0B7 351 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC25A47Q6Q0C1 308 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 CASP12Q6UXS9 341 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 CLVS1Q8IUQ0 354 aaPredicted RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 IQCF2Q8IXL9 164 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 GPR135Q8IZ08 494 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 TMEM123Q8N131 208 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 NDNFQ8TB73 568 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC22A8Q8TCC7 542 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SNRNP27Q8WVK2 155 aaKnown RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC9A6Q92581 669 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 INTS12Q96CB8 462 aaKnown RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SMIM19Q96E16 107 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SAMD8Q96LT4 415 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 LMF1Q96S06 567 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 LINC00470Q9BZP3 86 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 NDEL1Q9GZM8 345 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 PNRC2Q9NPJ4 139 aaKnown RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 TXNL4BQ9NX01 149 aaKnown RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 COPS7AQ9UBW8 275 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 PCDHGB7Q9Y5F8 929 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 V9GYQ6 96 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 CCDC88CQ9P219 2028 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 RALGAPA1Q6GYQ0 2036 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SCN3AQ9NY46 2000 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 LDLRAD4O15165 306 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 OR2T1O43869 369 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF254O75437 659 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 LALBAP00709 142 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 STATHP02808 62 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 CD36P16671 472 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF182P17025 639 aaPredicted RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 GADD45AP24522 165 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 ALDH3B1P43353 468 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 ZBTB37Q5TC79 503 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 LANCL3Q6ZV70 420 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 NLGN4XQ8N0W4 816 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 BPIFB6Q8NFQ5 453 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 OR11G2Q8NGC1 345 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 OR13C2Q8NGS9 318 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 CDC26Q8NHZ8 85 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 VANGL1Q8TAA9 524 aaPredicted RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 GPR148Q8TDV2 347 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 YIPF4Q9BSR8 244 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 MIXL1Q9H2W2 232 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 ASCL3Q9NQ33 180 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC17A5Q9NRA2 495 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 RCE1Q9Y256 329 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SDK2Q58EX2 2172 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 DHRS7CA6NNS2 312 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 RNF13O43567 381 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 WISP1O95388 367 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SERPINA7P05543 415 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 MELTFP08582 738 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 PPP5CP53041 499 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SELENBP1Q13228 472 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SRSF5Q13243 272 aaKnown RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 ARMCX4Q5H9R4 360 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 RPL22L1Q6P5R6 122 aaKnown RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 FIGNL1Q6PIW4 674 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 TSSK4Q6SA08 328 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 CBLN3Q6UW01 205 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 GGNQ86UU5 652 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 FAM109AQ8N4B1 249 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 TCEANCQ8N8B7 351 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 IL17RDQ8NFM7 739 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 OR5M3Q8NGP4 307 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 OR6X1Q8NH79 312 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 TMEM234Q8WY98 164 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 OTUB1Q96FW1 271 aaPredicted RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SGCZQ96LD1 299 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms