RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 WNT2BQ93097 391 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 NXPE2Q96DL1 559 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 SFXN2Q96NB2 322 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 NMNAT3Q96T66 252 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 TMEM106CQ9BVX2 250 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 PLA2G2FQ9BZM2 168 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 ARHGEF17Q96PE2 2063 aaPredicted RBP15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 USP34Q70CQ2 3546 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 TRABD2BA6NFA1 517 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 PRKNO60260 465 aaPredicted RBP15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 GPR75O95800 540 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 CT62P0C5K7 136 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 HFEQ30201 348 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 USP53Q70EK8 1073 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 AHCYL2Q96HN2 611 aaKnown RBP15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 CNN2Q99439 309 aaKnown RBP15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZFYVE21Q9BQ24 234 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 WDR77Q9BQA1 342 aaPredicted RBP15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 ADAT1Q9BUB4 502 aaKnown RBP15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 KLF15Q9UIH9 416 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 RCE1Q9Y256 329 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 COL4A3Q01955 1670 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 OR2W5A6NFC9 320 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 DNASE2O00115 360 aaPredicted RBP15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 UBL3O95164 117 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 CA3P07451 260 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 IL9P15248 144 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 SIRPAP78324 504 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 S100A12P80511 92 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 LGALS3BPQ08380 585 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 SLC25A25Q6KCM7 469 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 CA5BP1Q8WTZ4 195 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 FAM3CQ92520 227 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 KISS1RQ969F8 398 aaPredicted RBP15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 OR2A5Q96R48 311 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 NANSQ9NR45 359 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 INPP5EQ9NRR6 644 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 CTSFQ9UBX1 484 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 STMND1H3BQB6 276 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 RDH16O75452 317 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 RLN2P04090 185 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 ARHGAP11AQ6P4F7 1023 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZNF613Q6PF04 617 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 FRMD1Q8N878 549 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 MKKSQ9NPJ1 570 aaPredicted RBP15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 GPR160Q9UJ42 338 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZNF223Q9UK11 482 aaPredicted RBP15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 ATXN7L1Q9ULK2 861 aaPredicted RBP15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 IDSB3KWA1 339 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 EPXP11678 715 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 PTHLHP12272 177 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 HOXB2P14652 356 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 THBS2P35442 1172 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 GDNFP39905 211 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 FNTBP49356 437 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 FGL1Q08830 312 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 ERV3-1Q14264 604 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 GPR18Q14330 331 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZNF124Q15973 351 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 OOSP2Q86WS3 158 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 FBXO17Q96EF6 278 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 TIMP4Q99727 224 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 RPP25Q9BUL9 199 aaKnown RBP15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 GTF2A1LQ9UNN4 478 aa15.17■□□□□ 0.02
CDC42EP4-201ENST00000335793 SELENOFO60613 162 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 HPGDP15428 266 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 EMDP50402 254 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 ADPRHP54922 357 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 BAMBIQ13145 260 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 SMAD2Q15796 467 aaKnown RBP15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 TMEM240Q5SV17 173 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 FBXO46Q6PJ61 603 aaPredicted RBP15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 TMPRSS11FQ6ZWK6 438 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 FCRLAQ7L513 359 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 SLC35F2Q8IXU6 374 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 MEIOBQ8N635 442 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 METTL17Q9H7H0 456 aaPredicted RBP15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 NOX4Q9NPH5 578 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 DUSP22Q9NRW4 184 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 IKZF2Q9UKS7 526 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 NPFFR2Q9Y5X5 522 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 VCANP13611 3396 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 IMPA2O14732 288 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 ALDOBP05062 364 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 GALP22466 123 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 ARFIP1P53367 373 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 Q3ZCU0 254 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 C9orf152Q5JTZ5 239 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 POMZP3Q6PJE2 187 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 CSNK1A1LQ8N752 337 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZNF527Q8NB42 609 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 PELI1Q96FA3 418 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 UBL7Q96S82 380 aaPredicted RBP15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 REG4Q9BYZ8 158 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 LHX6Q9UPM6 363 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 EIF3GO75821 320 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 NDUFB2O95178 105 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 WNT1P04628 370 aa15.16■□□□□ 0.02
CDC42EP4-201ENST00000335793 S100A6P06703 90 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms