RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 GNPDA2Q8TDQ7 276 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 GIPC3Q8TF64 312 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZNF775Q96BV0 537 aaPredicted RBP12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 GMPPAQ96IJ6 420 aaPredicted RBP12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 DOCK7Q96N67 2140 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZFP3Q96NJ6 502 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 PKP2Q99959 881 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 SEMA6AQ9H2E6 1030 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 GLRX2Q9NS18 164 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 PDP1Q9P0J1 537 aaPredicted RBP12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 Q9UFV3 132 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 ERRFI1Q9UJM3 462 aaPredicted RBP12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 ING1Q9UK53 422 aaPredicted RBP12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 MED12LQ86YW9 2145 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 RP1L1Q8IWN7 2480 aaPredicted RBP12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZNF716A6NP11 495 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 C11orf98E9PRG8 122 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 BLOC1S5-TXNDC5H3BN57 136 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 CDC42EP2O14613 210 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 SS18L1O75177 396 aaPredicted RBP12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 VAMP5O95183 116 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 GASTP01350 101 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 YES1P07947 543 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 ADORA3P0DMS8 318 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 AHCYP23526 432 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 CTSSP25774 331 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 ARHGDIAP52565 204 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 ELF3P78545 371 aaPredicted RBP12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 PUDPQ08623 228 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 SLC17A1Q14916 467 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 TMEM201Q5SNT2 666 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZNF770Q6IQ21 691 aaPredicted RBP12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 C1orf94Q6P1W5 598 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 SHQ1Q6PI26 577 aaKnown RBP12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 OAFQ86UD1 273 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 CCDC71Q8IV32 467 aaPredicted RBP12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 TUSC5Q8IXB3 177 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 HS3ST5Q8IZT8 346 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 CNEP1R1Q8N9A8 125 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 AQP11Q8NBQ7 271 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR9K2Q8NGE7 335 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR51A7Q8NH64 312 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 OXGR1Q96P68 337 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 GPA33Q99795 319 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 SF3B5Q9BWJ5 86 aaKnown RBP12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 GP6Q9HCN6 339 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 TAS2R5Q9NYW4 299 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 RNF6Q9Y252 685 aa12.54□□□□□ -0.4
APOBEC3B-202ENST00000335760 RELNP78509 3460 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 MYO7BQ6PIF6 2116 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 IGKV3D-15A0A087WSY6 115 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 TRAV27A0A087WT01 109 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 A0A1W2PNV4 684 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 UNC119BA6NIH7 251 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZNF724A8MTY0 619 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 KLF4O43474 513 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 RNF13O43567 381 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 BAG2O95816 211 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 HPRP00739 348 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 CRHP06850 196 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 POU2F1P14859 743 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 AGTR1P30556 359 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 AQP2P41181 271 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 KIR2DL2P43627 348 aaPredicted RBP12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 SLC9A3P48764 834 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 SMSP52788 366 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 SLC16A1P53985 500 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 RPL18Q07020 188 aaKnown RBP12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZP4Q12836 540 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 C1DQ13901 141 aaKnown RBP12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 GUSBP1Q15486 140 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 FAM214BQ7L5A3 538 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR5K1Q8NHB7 308 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 MOSPD2Q8NHP6 518 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 GTPBP3Q969Y2 492 aaKnown RBP12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 NRBF2Q96F24 287 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 CENPNQ96H22 339 aaPredicted RBP12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 TNFRSF13CQ96RJ3 184 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 FEVQ99581 238 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 TACO1Q9BSH4 297 aaKnown RBP12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 SFXN3Q9BWM7 321 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 BCO1Q9HAY6 547 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 COQ3Q9NZJ6 369 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 EMC3Q9P0I2 261 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 B3GAT1Q9P2W7 334 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 HIF3AQ9Y2N7 669 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 EMC9Q9Y3B6 208 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 FLVCR1Q9Y5Y0 555 aa12.53□□□□□ -0.4
APOBEC3B-202ENST00000335760 LOC102725191A0A1B0GVB3 256 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 ARRDC5A6NEK1 342 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 GPR171O14626 319 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZG16O60844 167 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 SERPINI2O75830 405 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 TNFSF13O75888 250 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 AGFG2O95081 481 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 HLA-DOBP13765 273 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF23P17027 643 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF43P17038 809 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 PRKACGP22612 351 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 FPR3P25089 353 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms