RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 SNAP29O95721 258 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 NTF4P34130 210 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 AQP4P55087 323 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 TUBA4AP68366 448 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 APOFQ13790 326 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 PON3Q15166 354 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 CLEC12AQ5QGZ9 265 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 FAM69AQ5T7M9 428 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 KDM4DQ6B0I6 523 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 RTL6Q6ICC9 239 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 ZBTB49Q6ZSB9 765 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 CD163Q86VB7 1156 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 STK35Q8TDR2 534 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 ABHD3Q8WU67 409 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 POP5Q969H6 163 aaKnown RBP14.76□□□□□ -0.05
SHOX-201ENST00000334060 B3GAT1Q9P2W7 334 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 SIGLEC7Q9Y286 467 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 AP4B1Q9Y6B7 739 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 EFCAB9A8MZ26 197 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 MCIDASD6RGH6 385 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 HCN1O60741 890 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 CLIC3O95833 236 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 IFNA8P32881 189 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 SMIM11AP58511 58 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 SLC36A3Q495N2 470 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 ZNF585AQ6P3V2 769 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 SEM1Q6ZVN7 128 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 TMPRSS11FQ6ZWK6 438 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 RRM2BQ7LG56 351 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 CLDN22Q8N7P3 220 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 HS6ST2Q96MM7 605 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 MBOAT4Q96T53 435 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 GABARAPL1Q9H0R8 117 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 NANSQ9NR45 359 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 AASSQ9UDR5 926 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 ING1Q9UK53 422 aaPredicted RBP14.76□□□□□ -0.05
SHOX-201ENST00000334060 ADAM18Q9Y3Q7 739 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 CCDC160A6NGH7 325 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 CLCA1A8K7I4 914 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 MS4A18H0YCH9 400 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 TPOP07202 933 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 ZNF12P17014 697 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 UQCRFS1P47985 274 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 SLC9A3P48764 834 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 RPL18Q07020 188 aaKnown RBP14.75□□□□□ -0.05
SHOX-201ENST00000334060 DAG1Q14118 895 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 MS4A18Q3C1V0 323 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 ARHGAP11AQ6P4F7 1023 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 GFRALQ6UXV0 394 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 RPTNQ6XPR3 784 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 HIPK1Q86Z02 1210 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 SAMD8Q96LT4 415 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 PRDM14Q9GZV8 571 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 RSL24D1Q9UHA3 163 aaKnown RBP14.75□□□□□ -0.05
SHOX-201ENST00000334060 FAM215AQ9Y5M1 114 aa14.75□□□□□ -0.05
SHOX-201ENST00000334060 PTP4A3O75365 173 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 ACTL6AO96019 429 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 FPR3P25089 353 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 CARD18P57730 90 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 ZNF239Q16600 458 aaKnown RBP14.74□□□□□ -0.05
SHOX-201ENST00000334060 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.74□□□□□ -0.05
SHOX-201ENST00000334060 ESPNLQ6ZVH7 1005 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 OAFQ86UD1 273 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 RNF113BQ8IZP6 322 aaKnown RBP14.74□□□□□ -0.05
SHOX-201ENST00000334060 GHDCQ8N2G8 530 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 SVOPLQ8N434 492 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 SLC25A43Q8WUT9 341 aaPredicted RBP14.74□□□□□ -0.05
SHOX-201ENST00000334060 POTEKPQ9BYX7 375 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 PALMDQ9NP74 551 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 KIF17Q9P2E2 1029 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 COL12A1Q99715 3063 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 UNC119BA6NIH7 251 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 IGFBP5P24593 272 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 POU1F1P28069 291 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 PTGS2P35354 604 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 RPS4XP62701 263 aaKnown RBP14.74□□□□□ -0.05
SHOX-201ENST00000334060 H3F3AP84243 136 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 TSPAN31Q12999 210 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 MELKQ14680 651 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 ZNF620Q6ZNG0 422 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 LRRC75AQ8NAA5 344 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 OR4Q3Q8NH05 313 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 MFSD8Q8NHS3 518 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 TXNDC15Q96J42 360 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 TRIB1Q96RU8 372 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 PSD2Q9BQI7 771 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 DGCR6LQ9BY27 220 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 SLC19A3Q9BZV2 496 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 OR52D1Q9H346 318 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 MED29Q9NX70 200 aa14.74□□□□□ -0.05
SHOX-201ENST00000334060 PLPP3O14495 311 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 TOXO94900 526 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 PMS2P2O95744 297 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 CPN1P15169 458 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 AHCYP23526 432 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 UQCRC1P31930 480 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 AGFG1P52594 562 aaKnown RBP14.73□□□□□ -0.05
SHOX-201ENST00000334060 LGALS3BPQ08380 585 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 GPAT4Q86UL3 456 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 CCDC71Q8IV32 467 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms