RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 MRPS21P82921 87 aaKnown RBP12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 ARMC6Q6NXE6 501 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 RELTQ969Z4 430 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 MMABQ96EY8 250 aaPredicted RBP12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 NKIRAS2Q9NYR9 191 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 SPATA2Q9UM82 520 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 FLVCR2Q9UPI3 526 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 DMDP11532 3685 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 GMDSO60547 372 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 ARL6IP5O75915 188 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 WISP1O95388 367 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 DHFRP00374 187 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 SERPINA3P01011 423 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 GPR143P51810 404 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 ST3GAL2Q16842 350 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 SFRP4Q6FHJ7 346 aaPredicted RBP12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 FAM199XQ6PEV8 388 aaPredicted RBP12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 DEFB119Q8N690 84 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 ZNF615Q8N8J6 731 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 OR51J1Q9H342 316 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 ABRACLQ9P1F3 81 aa12.25□□□□□ -0.45
TUBA1B-201ENST00000332858 ARHGEF9O43307 516 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 PRAMEF2O60811 474 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 OR7A10O76100 309 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 GPANK1O95872 356 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 RPS4XP62701 263 aaKnown RBP12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 LTBQ06643 244 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 UNQ9370/PRO34162Q6UXP9 181 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 MED25Q71SY5 747 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 SLITRK4Q8IW52 837 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 ALG12Q9BV10 488 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 LRRC61Q9BV99 259 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 RTN4RQ9BZR6 473 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 ZNF337Q9Y3M9 751 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 TMEM72A0PK05 275 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 A8MUA0 341 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 HPXP02790 462 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 IFI6P09912 130 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 OR8G3PP0DMU2 310 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 FOSL1P15407 271 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 GDNFP39905 211 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 EGR4Q05215 589 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 SNTB2Q13425 540 aaKnown RBP12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 KLF9Q13886 244 aaPredicted RBP12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 GSG1Q2KHT4 349 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 KLHL26Q53HC5 615 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 FCRLAQ7L513 359 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 C10orf53Q8N6V4 93 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 SLC25A38Q96DW6 304 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 G6PC3Q9BUM1 346 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 SRA1Q9HD15 236 aaKnown RBP12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 MGAT4AQ9UM21 535 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 EFCAB7A8K855 629 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 C10orf142B7Z368 130 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 ARPC3O15145 178 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 LTBRP36941 435 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 IGLV3-21P80748 117 aaPredicted RBP12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 FUT7Q11130 342 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 KANSL1Q7Z3B3 1105 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 KRT77Q7Z794 578 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 HYLS1Q96M11 299 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 KLK11Q9UBX7 282 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 CAMK2AQ9UQM7 478 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 NUBP2Q9Y5Y2 271 aa12.24□□□□□ -0.45
TUBA1B-201ENST00000332858 TVP23AA6NH52 213 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 OR5K4A6NMS3 321 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 TPPPO94811 219 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 STOMP27105 288 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 GFERP55789 205 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 GNG2P59768 71 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 ZNF684Q5T5D7 378 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 OVCH1Q7RTY7 1134 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 DNAAF1Q8NEP3 725 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 ING1Q9UK53 422 aaPredicted RBP12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 COL4A2P08572 1712 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 CABIN1Q9Y6J0 2220 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 IFITM5A6NNB3 132 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 ZNF879B4DU55 563 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 GATBO75879 557 aaKnown RBP12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 POU3F3P20264 500 aaPredicted RBP12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 SOX2P48431 317 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 CCINQ13939 588 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 FAAP20Q6NZ36 180 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 LINGO2Q7L985 606 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 FAM122BQ7Z309 247 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 ZNF595Q8IYB9 648 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 PRR22Q8IZ63 422 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 CEP76Q8TAP6 659 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 PHOSPHO1Q8TCT1 267 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 GIMAP1Q8WWP7 306 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 ELF4Q99607 663 aaPredicted RBP12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 SPRTNQ9H040 489 aaPredicted RBP12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 CDCP1Q9H5V8 836 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 MMP17Q9ULZ9 603 aa12.23□□□□□ -0.45
TUBA1B-201ENST00000332858 ELOA3DA6NLF2 546 aaPredicted RBP12.22□□□□□ -0.45
TUBA1B-201ENST00000332858 ZNF593O00488 134 aaPredicted RBP12.22□□□□□ -0.45
TUBA1B-201ENST00000332858 GPR37O15354 613 aa12.22□□□□□ -0.45
TUBA1B-201ENST00000332858 GLCEO94923 617 aa12.22□□□□□ -0.45
TUBA1B-201ENST00000332858 PPM1FP49593 454 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms