RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 MRPL39Q9NYK5 338 aaKnown RBP12.39□□□□□ -0.43
LIMS1-201ENST00000332345 EDARQ9UNE0 448 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 CIB4A0PJX0 185 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 MS4A18H0YCH9 400 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 KRT33AO76009 404 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 OR6A2O95222 327 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 IGHV3-9P01782 118 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 TCN1P20061 433 aaPredicted RBP12.38□□□□□ -0.43
LIMS1-201ENST00000332345 CRYGSP22914 178 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 EDNRAP25101 427 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 CCKARP32238 428 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 KRTAP10-9P60411 292 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 LTBQ06643 244 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 FAPQ12884 760 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 MS4A18Q3C1V0 323 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 WDR88Q6ZMY6 472 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 SSX8Q7RTT4 187 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 ABHD12BQ7Z5M8 362 aaPredicted RBP12.38□□□□□ -0.43
LIMS1-201ENST00000332345 TSPYL5Q86VY4 417 aaPredicted RBP12.38□□□□□ -0.43
LIMS1-201ENST00000332345 P2RY8Q86VZ1 359 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 EPHX4Q8IUS5 362 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 S100PBPQ96BU1 408 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 ZNF385AQ96PM9 386 aaKnown RBP12.38□□□□□ -0.43
LIMS1-201ENST00000332345 PRSS27Q9BQR3 290 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 ZNF426Q9BUY5 554 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 FNDC11Q9BVV2 318 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 AMBRA1Q9C0C7 1298 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 NGBQ9NPG2 151 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 NANSQ9NR45 359 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 DCAF13Q9NV06 445 aaKnown RBP12.38□□□□□ -0.43
LIMS1-201ENST00000332345 CD300AQ9UGN4 299 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 SAMD4AQ9UPU9 718 aaKnown RBP12.38□□□□□ -0.43
LIMS1-201ENST00000332345 TACC2O95359 2948 aa12.38□□□□□ -0.43
LIMS1-201ENST00000332345 HTR3EA5X5Y0 456 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 PLPP3O14495 311 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 LYZL6O75951 148 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 CH25HO95992 272 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 IGF2P01344 180 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 MT-ND1P03886 318 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 COX5AP20674 150 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 PTNP21246 168 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 IGHV1-2P23083 117 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 DNAJA1P31689 397 aaKnown RBP12.37□□□□□ -0.43
LIMS1-201ENST00000332345 TGFBR3Q03167 851 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 PUDPQ08623 228 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 TSC22D1Q15714 1073 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 TSPO2Q5TGU0 170 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 OR7E24Q6IFN5 339 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 NIPAL3Q6P499 406 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 C22orf34Q6ZV56 151 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 CYP4Z1Q86W10 505 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 NKAIN4Q8IVV8 208 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 UEVLDQ8IX04 471 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 ARHGAP24Q8N264 748 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 ZNF433Q8N7K0 673 aaPredicted RBP12.37□□□□□ -0.43
LIMS1-201ENST00000332345 OR5J2Q8NH18 312 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 TMEM239Q8WW34 195 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 MUCL1Q96DR8 90 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 HSH2DQ96JZ2 352 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 PRRC1Q96M27 445 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 MOGAT1Q96PD6 335 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 SLCO5A1Q9H2Y9 848 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 FKRPQ9H9S5 495 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 SLC7A10Q9NS82 523 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 TAS2R16Q9NYV7 291 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 SEC14L4Q9UDX3 406 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 MALT1Q9UDY8 824 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 MAGEL2Q9UJ55 1249 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 ZNF229Q9UJW7 825 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 A4GNTQ9UNA3 340 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 FAM32AQ9Y421 112 aaKnown RBP12.37□□□□□ -0.43
LIMS1-201ENST00000332345 NOX1Q9Y5S8 564 aa12.37□□□□□ -0.43
LIMS1-201ENST00000332345 FBN2P35556 2912 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 MAST4O15021 2626 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 SPG11Q96JI7 2443 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 KPNA4O00629 521 aaPredicted RBP12.36□□□□□ -0.43
LIMS1-201ENST00000332345 AKAP8O43823 692 aaKnown RBP12.36□□□□□ -0.43
LIMS1-201ENST00000332345 HRGP04196 525 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 THBDP07204 575 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 ADORA3P0DMS8 318 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 AHCYP23526 432 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 MPGP29372 298 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 YAP1P46937 504 aaKnown RBP12.36□□□□□ -0.43
LIMS1-201ENST00000332345 CLDN17P56750 224 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 FOXD4Q12950 439 aaPredicted RBP12.36□□□□□ -0.43
LIMS1-201ENST00000332345 TRAM2Q15035 370 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 ZNF74Q16587 644 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 FXNQ16595 210 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 BEX5Q5H9J7 111 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 TIMM23BQ5SRD1 257 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 TRPM8Q7Z2W7 1104 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 PXKQ7Z7A4 578 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 CDC20BQ86Y33 519 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 FAM156AQ8NDB6 213 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 RBM15BQ8NDT2 890 aaKnown RBP12.36□□□□□ -0.43
LIMS1-201ENST00000332345 TMEM255BQ8WV15 326 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 B3GAT1Q9P2W7 334 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 RCE1Q9Y256 329 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 MED31Q9Y3C7 131 aa12.36□□□□□ -0.43
LIMS1-201ENST00000332345 SNX13Q9Y5W8 968 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms