RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 METTL12A8MUP2 240 aa13.05□□□□□ -0.32
PABPC1-201ENST00000318607 I3L1I5 382 aaPredicted RBP13.05□□□□□ -0.32
PABPC1-201ENST00000318607 LINC01387J3KSC0 135 aa13.05□□□□□ -0.32
PABPC1-201ENST00000318607 MMP15P51511 669 aa13.05□□□□□ -0.32
PABPC1-201ENST00000318607 EIF2B1Q14232 305 aaKnown RBP13.05□□□□□ -0.32
PABPC1-201ENST00000318607 CMIPQ8IY22 773 aa13.05□□□□□ -0.32
PABPC1-201ENST00000318607 BPIFCQ8NFQ6 507 aa13.05□□□□□ -0.32
PABPC1-201ENST00000318607 OR2A1Q8NGT9 310 aa13.05□□□□□ -0.32
PABPC1-201ENST00000318607 OR14C36Q8NHC7 312 aa13.05□□□□□ -0.32
PABPC1-201ENST00000318607 SETD7Q8WTS6 366 aaKnown RBP13.05□□□□□ -0.32
PABPC1-201ENST00000318607 CNN2Q99439 309 aaKnown RBP13.05□□□□□ -0.32
PABPC1-201ENST00000318607 CMSS1Q9BQ75 279 aaKnown RBP13.05□□□□□ -0.32
PABPC1-201ENST00000318607 SLC22A11Q9NSA0 550 aa13.05□□□□□ -0.32
PABPC1-201ENST00000318607 COMMD9Q9P000 198 aa13.05□□□□□ -0.32
PABPC1-201ENST00000318607 IGHA1P01876 353 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 AMY2AP04746 511 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 AKR1C4P17516 323 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 PVALBP20472 110 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-201ENST00000318607 AP3S2P59780 193 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 NANOS3P60323 173 aaKnown RBP13.04□□□□□ -0.32
PABPC1-201ENST00000318607 DHCR24Q15392 516 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 TMEM205Q6UW68 189 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 GALNTL5Q7Z4T8 443 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 JAGN1Q8N5M9 183 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 OR4S1Q8NGB4 309 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 OR5K2Q8NHB8 316 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 SMARCD2Q92925 531 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 TMEM106AQ96A25 262 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 SLC25A36Q96CQ1 311 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 PGLYRP3Q96LB9 341 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 NPAS1Q99742 590 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 C7orf50Q9BRJ6 194 aaKnown RBP13.04□□□□□ -0.32
PABPC1-201ENST00000318607 C2orf42Q9NWW7 574 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 PIPOXQ9P0Z9 390 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 MPDZO75970 2070 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 IFITM5A6NNB3 132 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 ZNF879B4DU55 563 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 G3V3Q6 166 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 EIF1AYO14602 144 aaKnown RBP13.04□□□□□ -0.32
PABPC1-201ENST00000318607 ZP3P21754 424 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 EIF1AXP47813 144 aaKnown RBP13.04□□□□□ -0.32
PABPC1-201ENST00000318607 EFNB1P98172 346 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 DECR1Q16698 335 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 C2orf27AQ580R0 203 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 ARHGAP40Q5TG30 622 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 TSSK4Q6SA08 328 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 SFTPA2Q8IWL1 248 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 TCEAL8Q8IYN2 117 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 CCL4L1Q8NHW4 92 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 TRMT2BQ96GJ1 504 aaKnown RBP13.04□□□□□ -0.32
PABPC1-201ENST00000318607 SDF2Q99470 211 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 SLC6A7Q99884 636 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 MTHFD2LQ9H903 347 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-201ENST00000318607 SDK2Q58EX2 2172 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 A0A1B0GWA3 101 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 OTOL1A6NHN0 477 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-201ENST00000318607 FGF18O76093 207 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 PRAMEF17Q5VTA0 474 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 TMEM64Q6YI46 380 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 DPY19L4Q7Z388 723 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 LRRC25Q8N386 305 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-201ENST00000318607 NSMAFQ92636 917 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 NRIP3Q9NQ35 241 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 CGGBP1Q9UFW8 167 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-201ENST00000318607 OR5V1Q9UGF6 321 aa13.04□□□□□ -0.32
PABPC1-201ENST00000318607 D6RAR5 112 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 F8W036 122 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 PIN1P1O15428 100 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 PRNPP04156 253 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 PPP3CBP16298 524 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 KCNJ3P48549 501 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 TAS2R20P59543 309 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 BLOC1S1P78537 153 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 LTBQ06643 244 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 NHLRC3Q5JS37 347 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 OR4K14Q8NGD5 310 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 LRRC3BQ96PB8 259 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 DCAF16Q9NXF7 216 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 DEC1Q9P2X7 70 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 SERTM1A2A2V5 107 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 PLPP2O43688 288 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 EPHA4P54764 986 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 MLF2Q15773 248 aaPredicted RBP13.03□□□□□ -0.32
PABPC1-201ENST00000318607 GUCA2BQ16661 112 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 DCST2Q5T1A1 773 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 GLT8D1Q68CQ7 371 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 SLC48A1Q6P1K1 146 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 OR10R2Q8NGX6 335 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 PATE1Q8WXA2 126 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 CRB3Q9BUF7 120 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 SARGQ9BW04 601 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 ACTR10Q9NZ32 417 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 NCDNQ9UBB6 729 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 ACSL5Q9ULC5 683 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 MFSD2BA6NFX1 497 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 HPGDP15428 266 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 TYRP1P17643 537 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 PI3P19957 117 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 DLX5P56178 289 aa13.03□□□□□ -0.32
PABPC1-201ENST00000318607 RAP2BP61225 183 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms