RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SLC30A8Q8IWU4 369 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 LURAP1Q96LR2 239 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 ZNF426Q9BUY5 554 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 MCCC2Q9HCC0 563 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 GLRX2Q9NS18 164 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 BAG5Q9UL15 447 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 TESMINQ9Y4I5 508 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 MAP1AP78559 2803 aaPredicted RBP10.62□□□□□ -0.71
SCFD1-201ENST00000311943 ENO4A6NNW6 628 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 MRPL33O75394 65 aaKnown RBP10.62□□□□□ -0.71
SCFD1-201ENST00000311943 AHCYP23526 432 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 TUBA1BP68363 451 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 TUBA4AP68366 448 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 IL1RL1Q01638 556 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 LAPTM4AQ15012 233 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 ZNF74Q16587 644 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 NIPAL3Q6P499 406 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 NHLRC1Q6VVB1 395 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 TUBA1AQ71U36 451 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 PIGXQ8TBF5 258 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 NEUROG1Q92886 237 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 ZHX1-C8orf76Q96EF9 292 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 PIK3IP1Q96FE7 263 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 CLEC4MQ9H2X3 399 aaPredicted RBP10.62□□□□□ -0.71
SCFD1-201ENST00000311943 RASSF1Q9NS23 344 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 TAS2R5Q9NYW4 299 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 KCNN3Q9UGI6 736 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 SLC9A8Q9Y2E8 581 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 FAM221AA4D161 298 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 FMO6PO60774 539 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 HRGP04196 525 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 F13BP05160 661 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 NQO1P15559 274 aaKnown RBP10.61□□□□□ -0.71
SCFD1-201ENST00000311943 MAKP20794 623 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 LOXP28300 417 aaPredicted RBP10.61□□□□□ -0.71
SCFD1-201ENST00000311943 MELKQ14680 651 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 BEND4Q6ZU67 534 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 AAED1Q7RTV5 226 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 TRPM8Q7Z2W7 1104 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 IGFN1Q86VF2 1251 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 CDC20BQ86Y33 519 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 BHLHE22Q8NFJ8 381 aaPredicted RBP10.61□□□□□ -0.71
SCFD1-201ENST00000311943 OR52N5Q8NH56 324 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 OR52J3Q8NH60 311 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 MOSPD2Q8NHP6 518 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 APH1AQ96BI3 265 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 CCDC124Q96CT7 223 aaKnown RBP10.61□□□□□ -0.71
SCFD1-201ENST00000311943 C14orf79Q96F83 325 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 C7orf34Q96L11 122 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 NAA11Q9BSU3 229 aaPredicted RBP10.61□□□□□ -0.71
SCFD1-201ENST00000311943 POLDIP3Q9BY77 421 aaKnown RBP10.61□□□□□ -0.71
SCFD1-201ENST00000311943 DCAF13Q9NV06 445 aaKnown RBP10.61□□□□□ -0.71
SCFD1-201ENST00000311943 NPAP1Q9NZP6 1156 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 SELENONQ9NZV5 590 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 NDUFAF4Q9P032 175 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 ITGB1BP2Q9UKP3 347 aa10.61□□□□□ -0.71
SCFD1-201ENST00000311943 CADP27708 2225 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 KLF4O43474 513 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 TRAF3IP2O43734 574 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-201ENST00000311943 EIF1BO60739 113 aaKnown RBP10.6□□□□□ -0.71
SCFD1-201ENST00000311943 SORDQ00796 357 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 POU3F1Q03052 451 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-201ENST00000311943 RUNX1T1Q06455 604 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 IFI44LQ53G44 452 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 FBXW9Q5XUX1 488 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 TTC33Q6PID6 262 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-201ENST00000311943 Q6ZT83 130 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 H1FNTQ75WM6 255 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-201ENST00000311943 KIF18BQ86Y91 864 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 CLDN22Q8N7P3 220 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 SLC7A6OSQ96CW6 309 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-201ENST00000311943 ELOVL5Q9NYP7 299 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 CCDC168Q8NDH2 2452 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 A0A087WUU8 490 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-201ENST00000311943 ZNF503-AS2A6NEH8 195 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 PLPP3O14495 311 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 ADORA3P0DMS8 318 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 HSD17B1P14061 328 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 ZNF26P17031 533 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-201ENST00000311943 SPOCK1Q08629 439 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 ITGADQ13349 1161 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 PMS2P3Q13401 168 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 SEC23BQ15437 767 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 FXNQ16595 210 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 HIKESHIQ53FT3 197 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 ZNF433Q8N7K0 673 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-201ENST00000311943 TMEM239Q8WW34 195 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 RASSF5Q8WWW0 418 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 SEPHS2Q99611 448 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 TMEM43Q9BTV4 400 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 C12orf10Q9HB07 376 aa10.6□□□□□ -0.71
SCFD1-201ENST00000311943 FOXD3Q9UJU5 478 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-201ENST00000311943 A0A096LPE4 126 aa10.59□□□□□ -0.71
SCFD1-201ENST00000311943 TRBV4-1A0A0J9YWV2 114 aa10.59□□□□□ -0.71
SCFD1-201ENST00000311943 A0A1W2PPZ6 126 aa10.59□□□□□ -0.71
SCFD1-201ENST00000311943 BLOC1S5-TXNDC5H3BN57 136 aa10.59□□□□□ -0.71
SCFD1-201ENST00000311943 PDLIM1O00151 329 aa10.59□□□□□ -0.71
SCFD1-201ENST00000311943 CDC42EP2O14613 210 aa10.59□□□□□ -0.71
SCFD1-201ENST00000311943 DNPH1O43598 174 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms