RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 KLF13Q9Y2Y9 288 aaPredicted RBP15.79■□□□□ 0.12
KRT28-201ENST00000306658 OR2M5A3KFT3 312 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 RNF13O43567 381 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 FADS2O95864 444 aaKnown RBP15.79■□□□□ 0.12
KRT28-201ENST00000306658 TXNDC12O95881 172 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 SP1P08047 785 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 IMPDH2P12268 514 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 CD46P15529 392 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 SPINK2P20155 84 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 AHCYP23526 432 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 ARG2P78540 354 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.79■□□□□ 0.12
KRT28-201ENST00000306658 FOXO1Q12778 655 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 CRMP1Q14194 572 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 DEFB109BQ30KR1 87 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 TMEM176BQ3YBM2 270 aaPredicted RBP15.79■□□□□ 0.12
KRT28-201ENST00000306658 SLC25A25Q6KCM7 469 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 MEPCEQ7L2J0 689 aaKnown RBP15.79■□□□□ 0.12
KRT28-201ENST00000306658 FAM122BQ7Z309 247 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 SLC37A3Q8NCC5 494 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 MDS2Q8NDY4 140 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 OR4K13Q8NH42 304 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 OR14L1PQ8NHC6 308 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 C9orf43Q8TAL5 461 aaPredicted RBP15.79■□□□□ 0.12
KRT28-201ENST00000306658 RORBQ92753 470 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 PTP4A1Q93096 173 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 RELTQ969Z4 430 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 RNFT2Q96EX2 444 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 C5orf34Q96MH7 638 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 OR5B2Q96R09 309 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 UBL7Q96S82 380 aaPredicted RBP15.79■□□□□ 0.12
KRT28-201ENST00000306658 CDCA4Q9BXL8 241 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 TMEM185BQ9H7F4 350 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 ACOT13Q9NPJ3 140 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 INIPQ9NRY2 104 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 ALKBH4Q9NXW9 302 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 SEC14L4Q9UDX3 406 aa15.79■□□□□ 0.12
KRT28-201ENST00000306658 C11orf98E9PRG8 122 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 KLRC4-KLRK1H3BQV0 150 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 GDF1P27539 372 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 MAP2K4P45985 399 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 ZP4Q12836 540 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 TMED1Q13445 227 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 NIPAL3Q6P499 406 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 JAZF1Q86VZ6 243 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 SULF2Q8IWU5 870 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 CYB561A3Q8NBI2 242 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 SDR9C7Q8NEX9 313 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 BBS1Q8NFJ9 593 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 FCGR1BQ92637 280 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 TMIGD2Q96BF3 282 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 Q96M85 177 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.78■□□□□ 0.12
KRT28-201ENST00000306658 WARS2Q9UGM6 360 aaKnown RBP15.78■□□□□ 0.12
KRT28-201ENST00000306658 TRAPPC4Q9Y296 219 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 B3GALT5Q9Y2C3 310 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 COMMD3-BMI1R4GMX3 469 aa15.78■□□□□ 0.12
KRT28-201ENST00000306658 TEX13CA0A0J9YWL9 993 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 PINLYPA6NC86 204 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 SLC22A31A6NKX4 558 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 GJE1A6NN92 205 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 NME2P1O60361 137 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 FZD7O75084 574 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 TRAPPC6AO75865 159 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 RFPL3SP0C7P2 107 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 NME2P22392 152 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 DCKP27707 260 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 SFTPDP35247 375 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 RAC1P63000 192 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 TLE3Q04726 772 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 PUDPQ08623 228 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 RAB39AQ14964 217 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 TBCEQ15813 527 aaPredicted RBP15.77■□□□□ 0.12
KRT28-201ENST00000306658 KLHL12Q53G59 568 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 ARMC4Q5T2S8 1044 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 LSM14AQ8ND56 463 aaKnown RBP15.77■□□□□ 0.12
KRT28-201ENST00000306658 FDCSPQ8NFU4 85 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 FAR1Q8WVX9 515 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 LGALS12Q96DT0 336 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 CRELD1Q96HD1 420 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 MED20Q9H944 212 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 CHST11Q9NPF2 352 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 DIMT1Q9UNQ2 313 aaKnown RBP15.77■□□□□ 0.12
KRT28-201ENST00000306658 WASF3Q9UPY6 502 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 MSRB2Q9Y3D2 182 aa15.77■□□□□ 0.12
KRT28-201ENST00000306658 A0A1W2PRG6 482 aa15.76■□□□□ 0.11
KRT28-201ENST00000306658 ZNF99A8MXY4 864 aaPredicted RBP15.76■□□□□ 0.11
KRT28-201ENST00000306658 RAB36O95755 333 aa15.76■□□□□ 0.11
KRT28-201ENST00000306658 OPN1LWP04000 364 aa15.76■□□□□ 0.11
KRT28-201ENST00000306658 ATP6V1E1P36543 226 aa15.76■□□□□ 0.11
KRT28-201ENST00000306658 RNLSQ5VYX0 342 aa15.76■□□□□ 0.11
KRT28-201ENST00000306658 BORAQ6PGQ7 559 aa15.76■□□□□ 0.11
KRT28-201ENST00000306658 YRDCQ86U90 279 aaKnown RBP15.76■□□□□ 0.11
KRT28-201ENST00000306658 NPEPL1Q8NDH3 523 aa15.76■□□□□ 0.11
KRT28-201ENST00000306658 FAM83FQ8NEG4 500 aaPredicted RBP15.76■□□□□ 0.11
KRT28-201ENST00000306658 MUL1Q969V5 352 aa15.76■□□□□ 0.11
KRT28-201ENST00000306658 RASD2Q96D21 266 aa15.76■□□□□ 0.11
KRT28-201ENST00000306658 NMNAT3Q96T66 252 aa15.76■□□□□ 0.11
KRT28-201ENST00000306658 HCAR1Q9BXC0 346 aa15.76■□□□□ 0.11
KRT28-201ENST00000306658 HES7Q9BYE0 225 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms