RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 CKAP5Q14008 2032 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 SPTBN2O15020 2390 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 ASXL3Q9C0F0 2248 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 SHISA7A6NL88 538 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 STMND1H3BQB6 276 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 DUX1O43812 170 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 UBXN7O94888 489 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 OMPP47874 163 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 CCR9P51686 369 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 WNT3P56703 355 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 NXPH1P58417 271 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 BTN3A2P78410 334 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 SNTB1Q13884 538 aaKnown RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 SLC9A5Q14940 896 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 TRAM2Q15035 370 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 GGTA1PQ4G0N0 100 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 BAIAP2L2Q6UXY1 529 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 OR5M9Q8NGP3 310 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 GPBAR1Q8TDU6 330 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 PAQR8Q8TEZ7 354 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 SSX3Q99909 188 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 BCL2L14Q9BZR8 327 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 DUSP15Q9H1R2 295 aaPredicted RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 SLC25A32Q9H2D1 315 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 PIGMQ9H3S5 423 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 DMRT3Q9NQL9 472 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 GSN-AS1Q9NRJ2 163 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 ASH2LQ9UBL3 628 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 TECTAO75443 2155 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 CNTRLQ7Z7A1 2325 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 MAP1BP46821 2468 aaKnown RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 NAP1L6A6NFF2 107 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 ZNF860A6NHJ4 632 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 H0YIV9 168 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 CRYBA1P05813 215 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 ARAFP10398 606 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 UGT2B7P16662 529 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 HFEQ30201 348 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 ACSM3Q53FZ2 586 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 C12orf73Q69YU5 71 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 FIP1L1Q6UN15 594 aaKnown RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 ASPGQ86U10 573 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 EID2Q8N6I1 236 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 OR5W2Q8NH69 310 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 GNPDA2Q8TDQ7 276 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 RSC1A1Q92681 617 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 ARL11Q969Q4 196 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 S100A16Q96FQ6 103 aaKnown RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 SLITRK2Q9H156 845 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 FAM86C2PA6NEL3 165 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 LMO7DNF2Z398 122 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 RNASET2O00584 256 aaKnown RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 PIAS2O75928 621 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 IGF2P01344 180 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 LIMS3P0CW19 117 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 LIMS4P0CW20 117 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 AGTR1P30556 359 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 NTSP30990 170 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 RFX3P48380 749 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 LIMK1P53667 647 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 MELKQ14680 651 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 EIF2S3LQ2VIR3 472 aaKnown RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 FAM76BQ5HYJ3 339 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 TMEM201Q5SNT2 666 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 COMMD6Q7Z4G1 85 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 SYT9Q86SS6 491 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 CPOQ8IVL8 374 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 NAXDQ8IW45 347 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 SFTPA2Q8IWL1 248 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 LILRB2Q8N423 598 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 LINC00471Q8N535 108 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 OR52B4Q8NGK2 314 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 OR52N1Q8NH53 320 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 ACOT11Q8WXI4 607 aaPredicted RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 PTDSS2Q9BVG9 487 aa10.04□□□□□ -0.8
LSM3-201ENST00000306024 BHLHE41Q9C0J9 482 aaPredicted RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 ESRP2Q9H6T0 727 aaKnown RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 ZNF629Q9UEG4 869 aaPredicted RBP10.04□□□□□ -0.8
LSM3-201ENST00000306024 A0A1B0GUH1 482 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 FADS1O60427 444 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 MMP11P24347 488 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 RAG2P55895 527 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 RPS15AP62244 130 aaKnown RBP10.03□□□□□ -0.8
LSM3-201ENST00000306024 RBM39Q14498 530 aaKnown RBP10.03□□□□□ -0.8
LSM3-201ENST00000306024 PRAMEF17Q5VTA0 474 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 KHDRBS2Q5VWX1 349 aaKnown RBP10.03□□□□□ -0.8
LSM3-201ENST00000306024 OR5M1Q8NGP8 315 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 OR14A16Q8NHC5 309 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 FAM46AQ96IP4 442 aaKnown RBP10.03□□□□□ -0.8
LSM3-201ENST00000306024 ANKRD19PQ9H560 264 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 ISYNA1Q9NPH2 558 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 KRCC1Q9NPI7 259 aaPredicted RBP10.03□□□□□ -0.8
LSM3-201ENST00000306024 FSCN3Q9NQT6 498 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 ZSCAN32Q9NX65 697 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 KCMF1Q9P0J7 381 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 NCDNQ9UBB6 729 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 KLF15Q9UIH9 416 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 FBXL3Q9UKT7 428 aa10.03□□□□□ -0.8
LSM3-201ENST00000306024 K7ESF4 209 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms