RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 CDS1Q92903 461 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 OTUB2Q96DC9 234 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 PDCD1LG2Q9BQ51 273 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 SLC25A21Q9BQT8 299 aaPredicted RBP12.69□□□□□ -0.38
KARS-201ENST00000302445 ZNF559Q9BR84 538 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 RAB11FIP5Q9BXF6 653 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 TCF7L1Q9HCS4 588 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 TMEM138Q9NPI0 162 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 SLC17A5Q9NRA2 495 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 CHRNA9Q9UGM1 479 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 TCF20Q9UGU0 1960 aaKnown RBP12.69□□□□□ -0.38
KARS-201ENST00000302445 GXYLT2A0PJZ3 443 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 MANSC4A6NHS7 340 aaPredicted RBP12.69□□□□□ -0.38
KARS-201ENST00000302445 GLOD5A6NK44 160 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 SULT1C2O00338 296 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 ERI3O43414 337 aaKnown RBP12.69□□□□□ -0.38
KARS-201ENST00000302445 DNAJB6O75190 326 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 PRKRAO75569 313 aaKnown RBP12.69□□□□□ -0.38
KARS-201ENST00000302445 LAMP2P13473 410 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 FUT1P19526 365 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 PAX6P26367 422 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 DIO1P49895 249 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 PSMD4P55036 377 aaKnown RBP12.69□□□□□ -0.38
KARS-201ENST00000302445 POLR2GP62487 172 aaKnown RBP eCLIP12.69□□□□□ -0.38
KARS-201ENST00000302445 SREBF2Q12772 1141 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 Q499Y3 187 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 VWA2Q5GFL6 755 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 ELP2Q6IA86 826 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 ANKRD16Q6P6B7 361 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 OR2W3Q7Z3T1 314 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 ZNF227Q86WZ6 799 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 LDLRAD3Q86YD5 345 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 ZNF433Q8N7K0 673 aaPredicted RBP12.69□□□□□ -0.38
KARS-201ENST00000302445 OR5M8Q8NGP6 311 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 SCLYQ96I15 445 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 ZNF426Q9BUY5 554 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 POTEKPQ9BYX7 375 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 PRDM9Q9NQV7 894 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 ZFP57Q9NU63 452 aa12.69□□□□□ -0.38
KARS-201ENST00000302445 ZNF107Q9UII5 783 aaPredicted RBP12.69□□□□□ -0.38
KARS-201ENST00000302445 YBX2Q9Y2T7 364 aaKnown RBP12.69□□□□□ -0.38
KARS-201ENST00000302445 A0A0G2JN53 185 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 FGF16O43320 207 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 RNGTTO60942 597 aaKnown RBP12.68□□□□□ -0.38
KARS-201ENST00000302445 AK1P00568 194 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 PSMB5P28074 263 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 ACTBP60709 375 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 ACTG1P63261 375 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 LTBQ06643 244 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 MELKQ14680 651 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 PON3Q15166 354 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 EXOSC6Q5RKV6 272 aaKnown RBP12.68□□□□□ -0.38
KARS-201ENST00000302445 LY6G6FQ5SQ64 297 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 ZNF813Q6ZN06 617 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 ACOT7LQ6ZUV0 252 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 BEST3Q8N1M1 668 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 CYB561A3Q8NBI2 242 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 SLC16A11Q8NCK7 471 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 SDF2Q99470 211 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 TRMT61BQ9BVS5 477 aaKnown RBP12.68□□□□□ -0.38
KARS-201ENST00000302445 SLC25A18Q9H1K4 315 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 FBXL4Q9UKA2 621 aa12.68□□□□□ -0.38
KARS-201ENST00000302445 TRBV5-5A0A0J9YX44 114 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 GGT3PA6NGU5 568 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 TMEM200CA6NKL6 621 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 PPM1DO15297 605 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 FOLR2P14207 255 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 SYN1P17600 705 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 HLA-GP17693 338 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 ITPKBP27987 946 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 OC90Q02509 493 aaPredicted RBP12.67□□□□□ -0.38
KARS-201ENST00000302445 GUCA2BQ16661 112 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 ZNF750Q32MQ0 723 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 C4orf46Q504U0 113 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 AVPI1Q5T686 147 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 METRNLQ641Q3 311 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 C11orf87Q6NUJ2 197 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 ENPP7Q6UWV6 458 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 MAMSTRQ6ZN01 415 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 FAM122BQ7Z309 247 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 TMEM25Q86YD3 366 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 OR1J4Q8NGS1 313 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 SFT2D1Q8WV19 159 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 ZMYND19Q96E35 227 aaPredicted RBP12.67□□□□□ -0.38
KARS-201ENST00000302445 MYADMQ96S97 322 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 EXO5Q9H790 373 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 TMEM27Q9HBJ8 222 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 MEPEQ9NQ76 525 aaPredicted RBP12.67□□□□□ -0.38
KARS-201ENST00000302445 COMMD9Q9P000 198 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 MYO10Q9HD67 2058 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 TRAV27A0A087WT01 109 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 RNF222A6NCQ9 220 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 K7ESM1 405 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 YKT6O15498 198 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 SPINT1O43278 529 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 TGM5O43548 720 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 TACSTD2P09758 323 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 IFI6P09912 130 aa12.67□□□□□ -0.38
KARS-201ENST00000302445 CSRP1P21291 193 aaKnown RBP12.67□□□□□ -0.38
KARS-201ENST00000302445 ACHEP22303 614 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms