RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 LURAP1LQ8IV03 231 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 OR1M1Q8NGA1 313 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 MIB2Q96AX9 1013 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 HSPA12BQ96MM6 686 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 PDCD10Q9BUL8 212 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 SLC46A2Q9BY10 475 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 CAPN10Q9HC96 672 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 ZNF337Q9Y3M9 751 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 TET1Q8NFU7 2136 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 TBC1D3EA0A087X179 549 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 TMEM200CA6NKL6 621 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 SGCEO43556 437 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 CLEC3AO75596 197 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 GLSO94925 669 aaPredicted RBP11.95□□□□□ -0.5
TVP23A-201ENST00000299866 PAPLNO95428 1278 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 CD3DP04234 171 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 H2AFB1P0C5Y9 115 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 ZNF806P0C7X5 589 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 LIPCP11150 499 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 CBR1P16152 277 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 MAPK3P27361 379 aaPredicted RBP11.95□□□□□ -0.5
TVP23A-201ENST00000299866 PPIAP62937 165 aaKnown RBP11.95□□□□□ -0.5
TVP23A-201ENST00000299866 LTBQ06643 244 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 POU4F2Q12837 409 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 MFSD12Q6NUT3 480 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 OR14A16Q8NHC5 309 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 SFT2D1Q8WV19 159 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 NKX3-1Q99801 234 aaPredicted RBP11.95□□□□□ -0.5
TVP23A-201ENST00000299866 POFUT1Q9H488 388 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 TMEM231Q9H6L2 316 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 APMAPQ9HDC9 416 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 ZNF281Q9Y2X9 895 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 IER3IP1Q9Y5U9 82 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 CACNA1CQ13936 2221 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 IGKV1-8A0A0C4DH67 115 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 OR14I1A6ND48 311 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 CRYBA1P05813 215 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 RFC3P40938 356 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 STAC2Q6ZMT1 411 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 DND1Q8IYX4 353 aaKnown RBP11.94□□□□□ -0.5
TVP23A-201ENST00000299866 SPAG16Q8N0X2 631 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 SYS1Q8N2H4 156 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 CAMKVQ8NCB2 501 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 STEAP2Q8NFT2 490 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 SLC2A12Q8TD20 617 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 RGP1Q92546 391 aaPredicted RBP11.94□□□□□ -0.5
TVP23A-201ENST00000299866 MS4A6EQ96DS6 147 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 SLITRK2Q9H156 845 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 PIGMQ9H3S5 423 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 PRDM7Q9NQW5 492 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 HAO2Q9NYQ3 351 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 TRAV18A0A075B6X5 111 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 DUXAA6NLW8 204 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 H7C417 338 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 EIF3GO75821 320 aaKnown RBP eCLIP11.94□□□□□ -0.5
TVP23A-201ENST00000299866 ADCYAP1P18509 176 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 AK4P27144 223 aaPredicted RBP11.94□□□□□ -0.5
TVP23A-201ENST00000299866 CAPZA2P47755 286 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 EEF1A1P68104 462 aaKnown RBP11.94□□□□□ -0.5
TVP23A-201ENST00000299866 PON3Q15166 354 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 GXYLT1Q4G148 440 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 RPL13AP3Q6NVV1 102 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 ABHD17CQ6PCB6 329 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 UNQ6126/PRO20091Q6UXV3 157 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 NDUFAF7Q7L592 441 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 NRSN1Q8IZ57 195 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 RNF113BQ8IZP6 322 aaKnown RBP11.94□□□□□ -0.5
TVP23A-201ENST00000299866 OR5K2Q8NHB8 316 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 MFRPQ9BY79 579 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 KCNK15Q9H427 330 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 ADAP2Q9NPF8 381 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 PRSS16Q9NQE7 514 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 MTFP1Q9UDX5 166 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 FBXO4Q9UKT5 387 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 CES1P1Q9UKY3 287 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 ADAM18Q9Y3Q7 739 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 PLXNA2O75051 1894 aa11.94□□□□□ -0.5
TVP23A-201ENST00000299866 NUP210Q8TEM1 1887 aaPredicted RBP11.94□□□□□ -0.5
TVP23A-201ENST00000299866 A0A0D9SG52 128 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 C17orf113A0A1B0GUU1 675 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 OR5H14A6NHG9 310 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 KCNAB3O43448 404 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 LATO43561 262 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 CTNSO60931 367 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 ADRA2CP18825 462 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 ST8SIA6P61647 398 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 SLC7A9P82251 487 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 ID2Q02363 134 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 JMJD6Q6NYC1 403 aaPredicted RBP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 TMEM71Q6P5X7 295 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 FIGNL1Q6PIW4 674 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 TMPRSS11FQ6ZWK6 438 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 SDF2Q99470 211 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 DENND4CQ5VZ89 1909 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 A0A1B0GTH9 108 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 FAM25EA8MYX2 175 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 F5H0A9 414 aaPredicted RBP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 ANXA2P07355 339 aaKnown RBP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 FBXO45P0C2W1 286 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms