RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 FBXO8Q9NRD0 319 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 GAR1Q9NY12 217 aaKnown RBP13.84□□□□□ -0.19
SCN3B-201ENST00000299333 FAM227AF5H4B4 570 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 CLDN1O95832 211 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 P04436 131 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 GCAP28676 217 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
SCN3B-201ENST00000299333 CEBPEQ15744 281 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 SLC35G1Q2M3R5 365 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 TRIM61Q5EBN2 209 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 C3orf38Q5JPI3 329 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 SIGIRRQ6IA17 410 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 DMBX1Q8NFW5 382 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 PPP1R35Q8TAP8 253 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 SECTM1Q8WVN6 248 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 GPR34Q9UPC5 381 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 A0A0G2JLL6 359 aaPredicted RBP13.83□□□□□ -0.2
SCN3B-201ENST00000299333 A0A1W2PQU0 124 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 CHRM4P08173 479 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 PTGER4P35408 488 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 SLC6A8P48029 635 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 MDGA2Q7Z553 956 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 CPEB2Q7Z5Q1 589 aaKnown RBP13.83□□□□□ -0.2
SCN3B-201ENST00000299333 PRRT2Q7Z6L0 340 aaPredicted RBP13.83□□□□□ -0.2
SCN3B-201ENST00000299333 OR13C2Q8NGS9 318 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 PIGCQ92535 297 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 DYRK2Q92630 601 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 MAP6Q96JE9 813 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 GPRIN2O60269 458 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 ZNF26P17031 533 aaPredicted RBP13.83□□□□□ -0.2
SCN3B-201ENST00000299333 ZNF28P17035 718 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 SGPP1Q9BX95 441 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 SLC2A11Q9BYW1 496 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 OPA3Q9H6K4 179 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 CAMK2AQ9UQM7 478 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 NPFFR2Q9Y5X5 522 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 V9GYS6 101 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 ARSAP15289 507 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 GATMP50440 423 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 C1orf220Q5T0J3 134 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 FAM57BQ71RH2 274 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 PRSS45Q7RTY3 260 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 RNF175Q8N4F7 328 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 OR2T1O43869 369 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 PMS2P2O95744 297 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 ATP1B3P54709 279 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 SIRPAP78324 504 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 ZMAT1Q5H9K5 638 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 BCDIN3DQ7Z5W3 292 aaKnown RBP13.83□□□□□ -0.2
SCN3B-201ENST00000299333 MKXQ8IYA7 352 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 SUMF1Q8NBK3 374 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 NECAP1Q8NC96 275 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 OR56B1Q8NGI3 324 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 ADAMTS18Q8TE60 1221 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 C12orf10Q9HB07 376 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 RAB9BQ9NP90 201 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 EXOSC3Q9NQT5 275 aaKnown RBP13.83□□□□□ -0.2
SCN3B-201ENST00000299333 DCAF16Q9NXF7 216 aa13.83□□□□□ -0.2
SCN3B-201ENST00000299333 NME2P1O60361 137 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 DOK2O60496 412 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 OPN1LWP04000 364 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 F13BP05160 661 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 IL2RGP31785 369 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 MLF1P58340 268 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 SERINC5Q86VE9 423 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 METTL9Q9H1A3 318 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 SPACA1Q9HBV2 294 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 SNX11Q9Y5W9 270 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 LMO7Q8WWI1 1683 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 DPP4P27487 766 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 SNCAP37840 140 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 HOXA1P49639 335 aaPredicted RBP13.82□□□□□ -0.2
SCN3B-201ENST00000299333 RANP62826 216 aaKnown RBP13.82□□□□□ -0.2
SCN3B-201ENST00000299333 RPL24P83731 157 aaKnown RBP13.82□□□□□ -0.2
SCN3B-201ENST00000299333 PM20D1Q6GTS8 502 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 ZNF761Q86XN6 746 aaPredicted RBP13.82□□□□□ -0.2
SCN3B-201ENST00000299333 TMEM59Q9BXS4 323 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 SEMA4CQ9C0C4 833 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 PLK3Q9H4B4 646 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 OR5K4A6NMS3 321 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 DCTN6O00399 190 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 HSPB6O14558 160 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 TRAF3IP2O43734 574 aaPredicted RBP13.82□□□□□ -0.2
SCN3B-201ENST00000299333 LDB3O75112 727 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 TIMP2P16035 220 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 TMEM11P17152 192 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 ZMAT3Q9HA38 289 aaKnown RBP13.82□□□□□ -0.2
SCN3B-201ENST00000299333 OR14J1Q9UGF5 321 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 SLC22A7Q9Y694 548 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 TRAPPC2LH3BP13 241 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 FCGR2AP12318 317 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 GABRA2P47869 451 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 TSPAN31Q12999 210 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 OXA1LQ15070 435 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 LTC4SQ16873 150 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 TBPL2Q6SJ96 375 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 USP53Q70EK8 1073 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 IFI44Q8TCB0 444 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 PSMF1Q92530 271 aa13.82□□□□□ -0.2
SCN3B-201ENST00000299333 OR6C68A6NDL8 312 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms