RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 OR6K6Q8NGW6 343 aa23.19■■□□□ 1.3
SDCCAG3-201ENST00000298537 UFD1Q92890 307 aa23.19■■□□□ 1.3
SDCCAG3-201ENST00000298537 TMED9Q9BVK6 235 aa23.19■■□□□ 1.3
SDCCAG3-201ENST00000298537 ASPNQ9BXN1 380 aa23.19■■□□□ 1.3
SDCCAG3-201ENST00000298537 SPRY4Q9C004 299 aa23.19■■□□□ 1.3
SDCCAG3-201ENST00000298537 A8MVM7 634 aa23.18■■□□□ 1.3
SDCCAG3-201ENST00000298537 G3V3Y1 287 aa23.18■■□□□ 1.3
SDCCAG3-201ENST00000298537 MT-CO3P00414 261 aa23.18■■□□□ 1.3
SDCCAG3-201ENST00000298537 GRPRP30550 384 aa23.18■■□□□ 1.3
SDCCAG3-201ENST00000298537 TMED10P49755 219 aaKnown RBP23.18■■□□□ 1.3
SDCCAG3-201ENST00000298537 TIMM50Q3ZCQ8 353 aa23.18■■□□□ 1.3
SDCCAG3-201ENST00000298537 OTPQ5XKR4 325 aa23.18■■□□□ 1.3
SDCCAG3-201ENST00000298537 KBTBD8Q8NFY9 601 aa23.18■■□□□ 1.3
SDCCAG3-201ENST00000298537 OR52N1Q8NH53 320 aa23.18■■□□□ 1.3
SDCCAG3-201ENST00000298537 C1GALT1C1Q96EU7 318 aa23.18■■□□□ 1.3
SDCCAG3-201ENST00000298537 HIST1H2ABP04908 130 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 BMP4P12644 408 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 AHCYP23526 432 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 OR12D2P58182 307 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 MXD1Q05195 221 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 ZNF468Q5VIY5 522 aaPredicted RBP23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 RPTNQ6XPR3 784 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 HIST3H2AQ7L7L0 130 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 HIST1H2ACQ93077 130 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 PLGRKTQ9HBL7 147 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 AKIP1Q9NQ31 210 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 CLEC2LP0C7M8 214 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 SDHAP31040 664 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 TUBA1BP68363 451 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 GALEQ14376 348 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 FAM69AQ5T7M9 428 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 TUBA1AQ71U36 451 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 ZNF511Q8NB15 262 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 NLGN4YQ8NFZ3 816 aaPredicted RBP23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 POC1BQ8TC44 478 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 BARHL1Q9BZE3 327 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 C6orf62Q9GZU0 229 aaPredicted RBP23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 ANKRD10Q9NXR5 420 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 HAO2Q9NYQ3 351 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 COPS3Q9UNS2 423 aa23.17■■□□□ 1.3
SDCCAG3-201ENST00000298537 H3BML4 177 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 GPANK1O95872 356 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 ZNF404Q494X3 552 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 LINC01590Q5TEZ4 76 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 NDUFAF7Q7L592 441 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 WDSUB1Q8N9V3 476 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 ZNF417Q8TAU3 575 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 ZNF587Q96SQ5 575 aaPredicted RBP23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 TPK1Q9H3S4 243 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 TMEM185BQ9H7F4 350 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 SRA1Q9HD15 236 aaKnown RBP23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 CAB39Q9Y376 341 aaPredicted RBP23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 GRIP1Q9Y3R0 1128 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 EXT1Q16394 746 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 ZNF829Q3KNS6 432 aaPredicted RBP23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 CRTC2Q53ET0 693 aaPredicted RBP23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 HES3Q5TGS1 186 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 JAZF1Q86VZ6 243 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 C4orf36Q96KX1 117 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 HDHD5Q9BXW7 423 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 GRHPRQ9UBQ7 328 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 SSR3Q9UNL2 185 aa23.16■■□□□ 1.3
SDCCAG3-201ENST00000298537 J3QLW9 94 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 CCL3P10147 92 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 HLA-DOBP13765 273 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 ZNF19P17023 458 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 KRR1Q13601 381 aaKnown RBP23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 EXD3Q8N9H8 876 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 M1APQ8TC57 530 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 TMEM234Q8WY98 164 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 LIN37Q96GY3 246 aaPredicted RBP23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 WDR70Q9NW82 654 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 MRPS18BQ9Y676 258 aaKnown RBP23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 HTR3EA5X5Y0 456 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 DIO1P49895 249 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 PON3Q15166 354 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 ARMC4Q5T2S8 1044 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 B3GNTL1Q67FW5 361 aaPredicted RBP23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 MAMDC2Q7Z304 686 aaPredicted RBP23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 WDFY1Q8IWB7 410 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 MFSD4AQ8N468 514 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 OR5J2Q8NH18 312 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 KCNS3Q9BQ31 491 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 ISYNA1Q9NPH2 558 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 SNTG1Q9NSN8 517 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 BABAM2Q9NXR7 383 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 QPCTLQ9NXS2 382 aa23.15■■□□□ 1.3
SDCCAG3-201ENST00000298537 FTCDNL1E5RQL4 147 aa23.14■■□□□ 1.3
SDCCAG3-201ENST00000298537 E2F1Q01094 437 aa23.14■■□□□ 1.3
SDCCAG3-201ENST00000298537 PLPPR5Q32ZL2 321 aa23.14■■□□□ 1.3
SDCCAG3-201ENST00000298537 GLYR1Q49A26 553 aaPredicted RBP23.14■■□□□ 1.3
SDCCAG3-201ENST00000298537 TP53I3Q53FA7 332 aa23.14■■□□□ 1.3
SDCCAG3-201ENST00000298537 OR2M3Q8NG83 312 aa23.14■■□□□ 1.3
SDCCAG3-201ENST00000298537 ST8SIA1Q92185 356 aa23.14■■□□□ 1.3
SDCCAG3-201ENST00000298537 MARCH7Q9H992 704 aa23.14■■□□□ 1.3
SDCCAG3-201ENST00000298537 FARSAQ9Y285 508 aaKnown RBP23.14■■□□□ 1.3
SDCCAG3-201ENST00000298537 ZNF670-ZNF695F2Z2N8 137 aa23.14■■□□□ 1.29
SDCCAG3-201ENST00000298537 RNF13O43567 381 aa23.14■■□□□ 1.29
SDCCAG3-201ENST00000298537 AKAP8O43823 692 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms