RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FCRL1Q96LA6 429 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 CHST8Q9H2A9 424 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 MCTS1Q9ULC4 181 aaKnown RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 MRPL58Q14197 206 aaKnown RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 PAPD4Q6PIY7 484 aaKnown RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 NDUFAF7Q7L592 441 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 LRRC56Q8IYG6 542 aaPredicted RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 TMEM99Q8N816 258 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 OR4C15Q8NGM1 316 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 ELF4Q99607 663 aaPredicted RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 SIDT1Q9NXL6 827 aaKnown RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 KLHL42Q9P2K6 505 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 EXO1Q9UQ84 846 aaKnown RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 NDUFB2O95178 105 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 TPOP07202 933 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 MAKP20794 623 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 MSX1P28360 303 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 TMEM201Q5SNT2 666 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 LIMS2Q7Z4I7 341 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 CCDC71Q8IV32 467 aaPredicted RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 IL17RCQ8NAC3 791 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 OR5K2Q8NHB8 316 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 PAQR8Q8TEZ7 354 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 ADAMTS14Q8WXS8 1223 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 DCLRE1CQ96SD1 692 aaKnown RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 NARFLQ9H6Q4 476 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 DHDHQ9UQ10 334 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 K7ESM1 405 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 RAF1P04049 648 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 EEF1A1P68104 462 aaKnown RBP12.42□□□□□ -0.42
HPS3-201ENST00000296051 ZNF616Q08AN1 781 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 KCTD18Q6PI47 426 aaPredicted RBP12.42□□□□□ -0.42
HPS3-201ENST00000296051 FAM111BQ6SJ93 734 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 TMEM205Q6UW68 189 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 UNQ6126/PRO20091Q6UXV3 157 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 TMEM64Q6YI46 380 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 FER1L6-AS2Q96M78 137 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 CDC6Q99741 560 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 UTP23Q9BRU9 249 aaKnown RBP12.42□□□□□ -0.42
HPS3-201ENST00000296051 SEMA4GQ9NTN9 838 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 CAMK2AQ9UQM7 478 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 HS3ST3A1Q9Y663 406 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 PAPPAQ13219 1627 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 RGS11O94810 467 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 ICAM2P13598 275 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 ZNF35P13682 527 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 NPR2P20594 1047 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 S1PR1P21453 382 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 USF2Q15853 346 aaPredicted RBP12.42□□□□□ -0.42
HPS3-201ENST00000296051 MRPL2Q5T653 305 aaKnown RBP12.42□□□□□ -0.42
HPS3-201ENST00000296051 VASNQ6EMK4 673 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 EIF5AL1Q6IS14 154 aaKnown RBP12.42□□□□□ -0.42
HPS3-201ENST00000296051 ZNF322Q6U7Q0 402 aaPredicted RBP12.42□□□□□ -0.42
HPS3-201ENST00000296051 FAM83HQ6ZRV2 1179 aaPredicted RBP12.42□□□□□ -0.42
HPS3-201ENST00000296051 FAM26EQ8N5C1 309 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 SLC25A44Q96H78 314 aaPredicted RBP12.42□□□□□ -0.42
HPS3-201ENST00000296051 ISG20L2Q9H9L3 353 aaKnown RBP12.42□□□□□ -0.42
HPS3-201ENST00000296051 ATG4BQ9Y4P1 393 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 C17orf113A0A1B0GUU1 675 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 AIFM1O95831 613 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 GABRB1P18505 474 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 CD22P20273 847 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 OR1Q1Q15612 314 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 LAIR1Q6GTX8 287 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 OR52R1Q8NGF1 315 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 CCDC74AQ96AQ1 378 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 PLA2G12AQ9BZM1 189 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 OR51B6Q9H340 312 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 PTPRFP10586 1907 aa12.42□□□□□ -0.42
HPS3-201ENST00000296051 H7C1C5 153 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 FCMRO60667 390 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 CD79AP11912 226 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 POU3F2P20265 443 aaPredicted RBP12.41□□□□□ -0.42
HPS3-201ENST00000296051 ETV6P41212 452 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 WNT3P56703 355 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 LCN6P62502 163 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 TAGLNQ01995 201 aaKnown RBP12.41□□□□□ -0.42
HPS3-201ENST00000296051 ZNF169Q14929 603 aaPredicted RBP12.41□□□□□ -0.42
HPS3-201ENST00000296051 C9orf135Q5VTT2 229 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 RPL13AP3Q6NVV1 102 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 MAMDC2Q7Z304 686 aaPredicted RBP12.41□□□□□ -0.42
HPS3-201ENST00000296051 ADIPOR2Q86V24 386 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 RELL2Q8NC24 303 aaPredicted RBP12.41□□□□□ -0.42
HPS3-201ENST00000296051 OR10K1Q8NGX5 313 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 ST8SIA4Q92187 359 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 BORCS8Q96FH0 119 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 SPNS1Q9H2V7 528 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 IL21Q9HBE4 155 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 NOX4Q9NPH5 578 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 BDP1A6H8Y1 2624 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 FOXE1O00358 373 aaPredicted RBP12.41□□□□□ -0.42
HPS3-201ENST00000296051 HMGN4O00479 90 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 UBL3O95164 117 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 EIF4EP06730 217 aaKnown RBP12.41□□□□□ -0.42
HPS3-201ENST00000296051 DLSTP36957 453 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 GSG1LQ6UXU4 331 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 ABI3BPQ7Z7G0 1075 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 PGAM5Q96HS1 289 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 DHRS9Q9BPW9 319 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 C1QTNF6Q9BXI9 259 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms