RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ING1Q9UK53 422 aaPredicted RBP5.79□□□□□ -1.48
CD44-204ENST00000279452 A4GNTQ9UNA3 340 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 B3GALT5Q9Y2C3 310 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 TESMINQ9Y4I5 508 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 RELNP78509 3460 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 NUP214P35658 2090 aaPredicted RBP5.79□□□□□ -1.48
CD44-204ENST00000279452 ZNF407Q9C0G0 2248 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 ZGRF1Q86YA3 2104 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 MYO18BQ8IUG5 2567 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 ZNF726A6NNF4 738 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 EFCAB9A8MZ26 197 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 ZNF587BE7ETH6 402 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 SLC43A1O75387 559 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 LYPD3O95274 346 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 MT-ND1P03886 318 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 H1F0P07305 194 aaKnown RBP5.78□□□□□ -1.48
CD44-204ENST00000279452 EPXP11678 715 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 PRF1P14222 555 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 IGFBP2P18065 325 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 GPR4P46093 362 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 SELENOPP49908 381 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 ERFP50548 548 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 RASSF2P50749 326 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 CBX1P83916 185 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 LTBQ06643 244 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 ITGADQ13349 1161 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 TOP3AQ13472 1001 aaPredicted RBP5.78□□□□□ -1.48
CD44-204ENST00000279452 FLOT2Q14254 428 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 MELKQ14680 651 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 P2RY6Q15077 328 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 ZNF74Q16587 644 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 SFRP5Q5T4F7 317 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 TSPO2Q5TGU0 170 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 FBXW9Q5XUX1 488 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 TENM4Q6N022 2769 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 HMBOX1Q6NT76 420 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 KLHL24Q6TFL4 600 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 STAC2Q6ZMT1 411 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 CREB3L2Q70SY1 520 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 ABHD12BQ7Z5M8 362 aaPredicted RBP5.78□□□□□ -1.48
CD44-204ENST00000279452 NRMQ8IXM6 262 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 GABRG1Q8N1C3 465 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 GPR137CQ8N3F9 429 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 LRRC17Q8N6Y2 441 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 SCAIQ8N9R8 606 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 STEAP2Q8NFT2 490 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 OR6N1Q8NGY5 312 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 OR6S1Q8NH40 331 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 TMEM45BQ96B21 275 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 BPIFA2Q96DR5 249 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 ASB9Q96DX5 294 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 PIK3IP1Q96FE7 263 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 DACH2Q96NX9 599 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 WFIKKN1Q96NZ8 548 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 HS3ST6Q96QI5 342 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 PIP5K1AQ99755 562 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 PRSS27Q9BQR3 290 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 BTBD10Q9BSF8 475 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 EMC6Q9BV81 110 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 POLDIP3Q9BY77 421 aaKnown RBP5.78□□□□□ -1.48
CD44-204ENST00000279452 SLC19A3Q9BZV2 496 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 C1orf21Q9H246 121 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 CLEC4MQ9H2X3 399 aaPredicted RBP5.78□□□□□ -1.48
CD44-204ENST00000279452 SLCO5A1Q9H2Y9 848 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 MUC13Q9H3R2 512 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 FKRPQ9H9S5 495 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 SLC7A10Q9NS82 523 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 C20orf141Q9NUB4 165 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 MED29Q9NX70 200 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 MRPL39Q9NYK5 338 aaKnown RBP5.78□□□□□ -1.48
CD44-204ENST00000279452 TAS2R1Q9NYW7 299 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 ACTR3BQ9P1U1 418 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 ZNF229Q9UJW7 825 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 AURKCQ9UQB9 309 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 GPR52Q9Y2T5 361 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 ENPP4Q9Y6X5 453 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 NBASA2RRP1 2371 aa5.78□□□□□ -1.48
CD44-204ENST00000279452 TRAV27A0A087WT01 109 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 A0A1W2PR80 420 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 A0A1W2PRG6 482 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 A6NNC1 897 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 M0R3G1 203 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 PLPP3O14495 311 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 FFAR1O14842 300 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 DNAJC8O75937 253 aaPredicted RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 OR7A10O76100 309 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 GADD45GO95257 159 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 HPRP00739 348 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 F13BP05160 661 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 HLA-DOBP13765 273 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 IFNGR1P15260 489 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 PPP3CBP16298 524 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 RHCEP18577 417 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 FUT1P19526 365 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 PSMB1P20618 241 aaKnown RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 IGHV1-2P23083 117 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 RRM2P31350 389 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 RPL4P36578 427 aaKnown RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 CAPZA2P47755 286 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 P2RY4P51582 365 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms