RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 GSG1LQ6UXU4 331 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 RAB11FIP2Q7L804 512 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 AAED1Q7RTV5 226 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 PRICKLE2Q7Z3G6 844 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 TP53I13Q8NBR0 393 aaPredicted RBP14.22□□□□□ -0.13
TIMP3-201ENST00000266085 UBE2FQ969M7 185 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 RSPRY1Q96DX4 576 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 CDC6Q99741 560 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 WNT16Q9UBV4 365 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 CAMK2AQ9UQM7 478 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 A0A1W2PQ09 198 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 NUDT21O43809 227 aaKnown RBP14.21□□□□□ -0.13
TIMP3-201ENST00000266085 CD34P28906 385 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 ELMOD2Q8IZ81 293 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 TOMM40LQ969M1 308 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 KCTD12Q96CX2 325 aaKnown RBP14.21□□□□□ -0.13
TIMP3-201ENST00000266085 OR2B2Q9GZK3 357 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 APMAPQ9HDC9 416 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 NPFFR2Q9Y5X5 522 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 ACOD1A6NK06 481 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 ANKRD30BLA7E2S9 258 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 NOTOA8MTQ0 251 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 EIF4E2O60573 245 aaKnown RBP14.21□□□□□ -0.13
TIMP3-201ENST00000266085 SLC43A1O75387 559 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 AKR1C2P52895 323 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 CLDN17P56750 224 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 CCDC58Q4VC31 144 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 SLC16A14Q7RTX9 510 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 SLC46A3Q7Z3Q1 461 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 GRAMD2AQ8IUY3 354 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 SLC43A2Q8N370 569 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 SNIP1Q8TAD8 396 aaKnown RBP14.21□□□□□ -0.13
TIMP3-201ENST00000266085 OR5M11Q96RB7 305 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 OR51B6Q9H340 312 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 SLAMF7Q9NQ25 335 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 FKBP14Q9NWM8 211 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 RHBDD3Q9Y3P4 386 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 YBX1P67809 324 aaKnown RBP14.21□□□□□ -0.13
TIMP3-201ENST00000266085 ARHGAP11BQ3KRB8 267 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 METTL11BQ5VVY1 283 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 ANKRD53Q8N9V6 530 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 ZNF511Q8NB15 262 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 BRIX1Q8TDN6 353 aaKnown RBP14.21□□□□□ -0.13
TIMP3-201ENST00000266085 TMEM106AQ96A25 262 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 MVB12AQ96EY5 273 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 RRNAD1Q96FB5 475 aaKnown RBP14.21□□□□□ -0.13
TIMP3-201ENST00000266085 SEMA4GQ9NTN9 838 aa14.21□□□□□ -0.13
TIMP3-201ENST00000266085 CEP250Q9BV73 2442 aa14.21□□□□□ -0.14
TIMP3-201ENST00000266085 DDAH2O95865 285 aa14.21□□□□□ -0.14
TIMP3-201ENST00000266085 COL9A1P20849 921 aa14.21□□□□□ -0.14
TIMP3-201ENST00000266085 ISL1P61371 349 aa14.21□□□□□ -0.14
TIMP3-201ENST00000266085 RUNX2Q13950 521 aa14.21□□□□□ -0.14
TIMP3-201ENST00000266085 CNN3Q15417 329 aaKnown RBP14.21□□□□□ -0.14
TIMP3-201ENST00000266085 DESI1Q6ICB0 168 aa14.21□□□□□ -0.14
TIMP3-201ENST00000266085 C8orf44Q96CB5 159 aa14.21□□□□□ -0.14
TIMP3-201ENST00000266085 CNRIP1Q96F85 164 aaPredicted RBP14.21□□□□□ -0.14
TIMP3-201ENST00000266085 POMT2Q9UKY4 750 aa14.21□□□□□ -0.14
TIMP3-201ENST00000266085 C5orf67F2Z3F1 127 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 EIF1BO60739 113 aaKnown RBP14.2□□□□□ -0.14
TIMP3-201ENST00000266085 RAB40ALP0C0E4 278 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 DHRS4L2Q6PKH6 230 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 GRINAQ7Z429 371 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 PPP1R35Q8TAP8 253 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 CPT1CQ8TCG5 803 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 RAB40AQ8WXH6 277 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 Q96M85 177 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 KLHL13Q9P2N7 655 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 PRAMEF25A6NGN4 478 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 TMEM212A6NML5 194 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 KNG1P01042 644 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 MSX1P28360 303 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 BIDP55957 195 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 EP300Q09472 2414 aaPredicted RBP14.2□□□□□ -0.14
TIMP3-201ENST00000266085 EXT1Q16394 746 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 BCDIN3DQ7Z5W3 292 aaKnown RBP14.2□□□□□ -0.14
TIMP3-201ENST00000266085 PXKQ7Z7A4 578 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 CA13Q8N1Q1 262 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 PARP16Q8N5Y8 322 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 ARL5BQ96KC2 179 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 TWSG1Q9GZX9 223 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 ARRDC1-AS1Q9H2J1 176 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 CDCP1Q9H5V8 836 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 SLC33A1O00400 549 aaPredicted RBP14.2□□□□□ -0.14
TIMP3-201ENST00000266085 PRKNO60260 465 aaPredicted RBP14.2□□□□□ -0.14
TIMP3-201ENST00000266085 CYB561P49447 251 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 FAM53BQ14153 422 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 SYT6Q5T7P8 510 aaPredicted RBP14.2□□□□□ -0.14
TIMP3-201ENST00000266085 FAM219BQ5XKK7 198 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 ZNF454Q8N9F8 522 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 TBC1D15Q8TC07 691 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 SCGB1C1Q8TD33 95 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 MMP28Q9H239 520 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 CHST8Q9H2A9 424 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 WDR76Q9H967 626 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 ZNF225Q9UK10 706 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 SPEF1Q9Y4P9 236 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 PCDHGA6Q9Y5G7 932 aa14.2□□□□□ -0.14
TIMP3-201ENST00000266085 H0YIG0 161 aa14.19□□□□□ -0.14
TIMP3-201ENST00000266085 SLC22A5O76082 557 aa14.19□□□□□ -0.14
TIMP3-201ENST00000266085 TP53P04637 393 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms