RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 OR2AT4A6NND4 320 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 H3BSH0 61 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 TXNDC12O95881 172 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 CBX7O95931 251 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 APOC1P02654 83 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 SBK2P0C263 348 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 G0S2P27469 103 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 FGF9P31371 208 aaPredicted RBP14.97□□□□□ -0.01
CTCF-201ENST00000264010 ARRB1P49407 418 aaPredicted RBP14.97□□□□□ -0.01
CTCF-201ENST00000264010 ZNF136P52737 540 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 PSMA6P60900 246 aaKnown RBP14.97□□□□□ -0.01
CTCF-201ENST00000264010 IFITM2Q01629 132 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 ZNF169Q14929 603 aaPredicted RBP14.97□□□□□ -0.01
CTCF-201ENST00000264010 NSDHLQ15738 373 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 SSX2Q16385 188 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 POMGNT2Q8NAT1 580 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 RBPMSQ93062 196 aaKnown RBP14.97□□□□□ -0.01
CTCF-201ENST00000264010 CACNG6Q9BXT2 260 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 C20orf141Q9NUB4 165 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 TRAPPC4Q9Y296 219 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 PRR19A6NJB7 356 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 MCIDASD6RGH6 385 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 E9PQ18 207 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 ITGA10O75578 1167 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 CSN2P05814 226 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 APEX1P27695 318 aaKnown RBP14.97□□□□□ -0.01
CTCF-201ENST00000264010 OR1D4P47884 311 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 MTNR1BP49286 362 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 NRG3P56975 720 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 BDH1Q02338 343 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 PLCXD2Q0VAA5 305 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 ACSM3Q53FZ2 586 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 LEG1Q6P5S2 330 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 SLITRK4Q8IW52 837 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 SFTPA2Q8IWL1 248 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 PDZD9Q8IXQ8 264 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 CA5BP1Q8WTZ4 195 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 PHF7Q9BWX1 381 aaPredicted RBP14.97□□□□□ -0.01
CTCF-201ENST00000264010 BIN3Q9NQY0 253 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 AKAP7Q9P0M2 348 aaPredicted RBP14.97□□□□□ -0.01
CTCF-201ENST00000264010 EXOGQ9Y2C4 368 aaKnown RBP14.97□□□□□ -0.01
CTCF-201ENST00000264010 ZNF432O94892 652 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 RPP14O95059 124 aaKnown RBP14.97□□□□□ -0.01
CTCF-201ENST00000264010 PAHP00439 452 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 HTR2AP28223 471 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 EMDP50402 254 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 CTXN1P60606 82 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 KCTD20Q7Z5Y7 419 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 WDFY2Q96P53 400 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 TCF7L1Q9HCS4 588 aa14.97□□□□□ -0.01
CTCF-201ENST00000264010 RP2O75695 350 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 CD1CP29017 333 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 PM20D2Q8IYS1 436 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 OR5M3Q8NGP4 307 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 FAM131CQ96AQ9 280 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 SENP5Q96HI0 755 aaPredicted RBP14.96□□□□□ -0.01
CTCF-201ENST00000264010 MGAT4CQ9UBM8 478 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 SIGLEC7Q9Y286 467 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 RPH3AQ9Y2J0 694 aaPredicted RBP14.96□□□□□ -0.01
CTCF-201ENST00000264010 TEX13CA0A0J9YWL9 993 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 A0A1W2PPL8 197 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 CD2P06729 351 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 RAB5BP61020 215 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 SLC22A18ASQ8N1D0 253 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 OR4N2Q8NGD1 307 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 C16orf52Q8NHV5 167 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 THAP6Q8TBB0 222 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 RFT1Q96AA3 541 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 ADOQ96SZ5 270 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 RXFP3Q9NSD7 469 aa14.96□□□□□ -0.01
CTCF-201ENST00000264010 A0A0B4J2E0 115 aa14.96□□□□□ -0.02
CTCF-201ENST00000264010 CENPVL1A0A0U1RR11 272 aa14.96□□□□□ -0.02
CTCF-201ENST00000264010 A0A1B0GX12 115 aa14.96□□□□□ -0.02
CTCF-201ENST00000264010 LILRA5A6NI73 299 aa14.96□□□□□ -0.02
CTCF-201ENST00000264010 FCN2Q15485 313 aa14.96□□□□□ -0.02
CTCF-201ENST00000264010 C4orf46Q504U0 113 aa14.96□□□□□ -0.02
CTCF-201ENST00000264010 TPRA1Q86W33 373 aa14.96□□□□□ -0.02
CTCF-201ENST00000264010 UBQLNLQ8IYU4 475 aa14.96□□□□□ -0.02
CTCF-201ENST00000264010 SIRT6Q8N6T7 355 aa14.96□□□□□ -0.02
CTCF-201ENST00000264010 COMMD4Q9H0A8 199 aa14.96□□□□□ -0.02
CTCF-201ENST00000264010 MMACHCQ9Y4U1 282 aa14.96□□□□□ -0.02
CTCF-201ENST00000264010 SLC6A8P48029 635 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 MC2RQ01718 297 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 MED25Q71SY5 747 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 BCORP1Q8N888 145 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 SRA1Q9HD15 236 aaKnown RBP14.95□□□□□ -0.02
CTCF-201ENST00000264010 OR2T7P0C7T2 308 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 C14orf28Q4W4Y0 310 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 ALG10Q5BKT4 473 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 ZMAT1Q5H9K5 638 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 DPY19L2P2Q6ZN68 376 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 OR6F1Q8NGZ6 308 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 OR2T27Q8NH04 317 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 KCTD12Q96CX2 325 aaKnown RBP14.95□□□□□ -0.02
CTCF-201ENST00000264010 SLC46A1Q96NT5 459 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 GPN1Q9HCN4 374 aaPredicted RBP14.95□□□□□ -0.02
CTCF-201ENST00000264010 MN1Q10571 1320 aaPredicted RBP14.95□□□□□ -0.02
CTCF-201ENST00000264010 PGCP20142 388 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 SMAD4Q13485 552 aaKnown RBP14.95□□□□□ -0.02
CTCF-201ENST00000264010 CCINQ13939 588 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms