RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 CD3EP07766 207 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 TNFRSF1BP20333 461 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 DRD4P21917 467 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 MPGP29372 298 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 LSP1P33241 339 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 H1FNTQ75WM6 255 aaPredicted RBP20.17■□□□□ 0.82
LSM4-201ENST00000252816 WDR31Q8NA23 367 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 POMGNT2Q8NAT1 580 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 OR2T12Q8NG77 320 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 OR6S1Q8NH40 331 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 RASSF5Q8WWW0 418 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 IGFBPL1Q8WX77 278 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 AKAP1Q92667 903 aaKnown RBP eCLIP20.17■□□□□ 0.82
LSM4-201ENST00000252816 NEUROG1Q92886 237 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 OXGR1Q96P68 337 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 EPYCQ99645 322 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 CCL19Q99731 98 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 PIP5K1AQ99755 562 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 MYLK2Q9H1R3 596 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 DSCAMO60469 2012 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 ZNF43P17038 809 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 CLDN17P56750 224 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 ADAM8P78325 824 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 OR7E24Q6IFN5 339 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 NIPAL3Q6P499 406 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 CARM1Q86X55 608 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 TGIF2LYQ8IUE0 185 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 KRTAP1-3Q8IUG1 177 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 SLC15A3Q8IY34 581 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 MICU2Q8IYU8 434 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 PIGTQ969N2 578 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 SLC41A3Q96GZ6 507 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 SH3GLB1Q9Y371 365 aa20.16■□□□□ 0.82
LSM4-201ENST00000252816 TRAPPC13A5PLN9 417 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 MS4A18H0YCH9 400 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 UPK3AO75631 287 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 ZNF432O94892 652 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 HPRP00739 348 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 MFSD13AQ14CX5 517 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 MS4A18Q3C1V0 323 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 ADAM5Q6NVV9 412 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 C8orf82Q6P1X6 216 aaPredicted RBP20.15■□□□□ 0.82
LSM4-201ENST00000252816 LINGO2Q7L985 606 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 SSX8Q7RTT4 187 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 ADPRHL1Q8NDY3 354 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 C1orf162Q8NEQ5 155 aaPredicted RBP20.15■□□□□ 0.82
LSM4-201ENST00000252816 KBTBD8Q8NFY9 601 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 PROX1Q92786 737 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 ALKBH3Q96Q83 286 aaPredicted RBP20.15■□□□□ 0.82
LSM4-201ENST00000252816 BAG5Q9UL15 447 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 SLC7A7Q9UM01 511 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 CORINQ9Y5Q5 1042 aa20.15■□□□□ 0.82
LSM4-201ENST00000252816 ARID1AO14497 2285 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 LOC102725191A0A1B0GVB3 256 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 ELOVL7A1L3X0 281 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 TRAF3IP2O43734 574 aaPredicted RBP20.14■□□□□ 0.81
LSM4-201ENST00000252816 SNX3O60493 162 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 SHOX2O60902 331 aaPredicted RBP20.14■□□□□ 0.81
LSM4-201ENST00000252816 HOXC12P31275 282 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 KDELR2P33947 212 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 SLC25A3Q00325 362 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 TGFBR3Q03167 851 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 LRRC23Q53EV4 343 aaPredicted RBP20.14■□□□□ 0.81
LSM4-201ENST00000252816 CYBRD1Q53TN4 286 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 ARPINQ7Z6K5 226 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 C10orf53Q8N6V4 93 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 ZNF611Q8N823 705 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 SCAIQ8N9R8 606 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 TMUB1Q9BVT8 246 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 EFCAB1Q9HAE3 211 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 SLC17A5Q9NRA2 495 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 MRPL39Q9NYK5 338 aaKnown RBP20.14■□□□□ 0.81
LSM4-201ENST00000252816 RCE1Q9Y256 329 aa20.14■□□□□ 0.81
LSM4-201ENST00000252816 MTORP42345 2549 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 ACANP16112 2415 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 GMNCA6NCL1 334 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 NME4O00746 187 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 SMPD2O60906 423 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 KRT33AO76009 404 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 HLA-DOBP13765 273 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 NQO1P15559 274 aaKnown RBP20.13■□□□□ 0.81
LSM4-201ENST00000252816 CDH2P19022 906 aaPredicted RBP20.13■□□□□ 0.81
LSM4-201ENST00000252816 ZNF83P51522 516 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 SLC7A2P52569 658 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 IL1RL1Q01638 556 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 LIPEQ05469 1076 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 C1DQ13901 141 aaKnown RBP20.13■□□□□ 0.81
LSM4-201ENST00000252816 NHLRC1Q6VVB1 395 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 WFDC11Q8NEX6 87 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 PRSS27Q9BQR3 290 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 ZNF426Q9BUY5 554 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 C1QTNF6Q9BXI9 259 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 ASPNQ9BXN1 380 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 LINC00470Q9BZP3 86 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 AP3M1Q9Y2T2 418 aa20.13■□□□□ 0.81
LSM4-201ENST00000252816 ZNF587BE7ETH6 402 aa20.12■□□□□ 0.81
LSM4-201ENST00000252816 IFNA14P01570 189 aa20.12■□□□□ 0.81
LSM4-201ENST00000252816 OR1E2P47887 323 aa20.12■□□□□ 0.81
LSM4-201ENST00000252816 NUDT2P50583 147 aa20.12■□□□□ 0.81
LSM4-201ENST00000252816 NKX6-1P78426 367 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms