RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PDK3Q15120 406 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 POU4F3Q15319 338 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 OR7A5Q15622 319 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 CTU2Q2VPK5 515 aaKnown RBP11.61□□□□□ -0.55
LSM8-201ENST00000249299 LINC00303Q3SY05 128 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 KRTCAP3Q53RY4 240 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 MEDAGQ5VYS4 303 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 FAM205BPQ63HN1 556 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 TRILQ7L0X0 811 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 HDDC2Q7Z4H3 204 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 PXKQ7Z7A4 578 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 GGNQ86UU5 652 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 SIAH3Q8IW03 269 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 FAM26EQ8N5C1 309 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 LRRC17Q8N6Y2 441 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 OR8D4Q8NGM9 314 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 OR2V1Q8NHB1 315 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 ZNF417Q8TAU3 575 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 CPNE4Q96A23 557 aaPredicted RBP11.61□□□□□ -0.55
LSM8-201ENST00000249299 SLC25A36Q96CQ1 311 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 WBP1Q96G27 269 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 Q96MT0 163 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 ZNF587Q96SQ5 575 aaPredicted RBP11.61□□□□□ -0.55
LSM8-201ENST00000249299 TAS2R5Q9NYW4 299 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 KLHL21Q9UJP4 597 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 TP53TG5Q9Y2B4 290 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 NOX1Q9Y5S8 564 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 CHD8Q9HCK8 2581 aa11.61□□□□□ -0.55
LSM8-201ENST00000249299 A0A0J9YW62 118 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 AQP7P3A6NL99 342 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 SNTNA6NMZ2 147 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 LRRN3E7EW58 273 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 BLOC1S5-TXNDC5H3BN57 136 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 SURF4O15260 269 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 AHCYL1O43865 530 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 IFNGP01579 166 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 GNAO1P09471 354 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 CCDC159P0C7I6 412 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 SFTPDP35247 375 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 RPL4P36578 427 aaKnown RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 AQP2P41181 271 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 CARD18P57730 90 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 OR2B6P58173 313 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 RPS3AP61247 264 aaKnown RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 RPL18Q07020 188 aaKnown RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 TOP3AQ13472 1001 aaPredicted RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 RNFT1Q5M7Z0 435 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 TMEM201Q5SNT2 666 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 ACSM5Q6NUN0 579 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 PM20D2Q8IYS1 436 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 ATP6V1C2Q8NEY4 427 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 OR5M1Q8NGP8 315 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 FAM81AQ8TBF8 368 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 CNBD2Q96M20 576 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 OXGR1Q96P68 337 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 IFT27Q9BW83 186 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 SF3B5Q9BWJ5 86 aaKnown RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 LDAHQ9H6V9 325 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 CMC2Q9NRP2 79 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 INIPQ9NRY2 104 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 LOC400499M0QZD8 3231 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 CACNA1GO43497 2377 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 CENPBD1B2RD01 187 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 IGFBP1P08833 259 aaPredicted RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 ADORA3P0DMS8 318 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 GABRB1P18505 474 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 PTNP21246 168 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 NOS3P29474 1203 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 SDHAP31040 664 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 RFC3P40938 356 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 DAP3P51398 398 aaKnown RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 P2RY4P51582 365 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 CLDN18P56856 261 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 IL5RAQ01344 420 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 CD47Q08722 323 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 TMED1Q13445 227 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 MAD2L1BPQ15013 274 aaPredicted RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 SF3B4Q15427 424 aaKnown RBP eCLIP11.6□□□□□ -0.55
LSM8-201ENST00000249299 SNAPC1Q16533 368 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 OCLNQ16625 522 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 PLEKHN1Q494U1 663 aaPredicted RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 RBM48Q5RL73 367 aaKnown RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 HBMQ6B0K9 141 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 PTCHD4Q6ZW05 846 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 FAM122BQ7Z309 247 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 ADCK1Q86TW2 530 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 MEX3DQ86XN8 651 aaKnown RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 CCDC71Q8IV32 467 aaPredicted RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 ENTHD1Q8IYW4 607 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 OR4Q3Q8NH05 313 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 TMEM163Q8TC26 289 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 HDAC2Q92769 488 aaKnown RBP11.6□□□□□ -0.55
LSM8-201ENST00000249299 ZNF566Q969W8 418 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 SARAFQ96BY9 339 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 PLEKHA8Q96JA3 519 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 SLC6A15Q9H2J7 730 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 TXNIPQ9H3M7 391 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 TMEM185BQ9H7F4 350 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 PLCXD1Q9NUJ7 323 aa11.6□□□□□ -0.55
LSM8-201ENST00000249299 BLOC1S6Q9UL45 172 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms