RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 RBM34P42696 430 aaKnown RBP21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 OR1E2P47887 323 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 TGFBR3Q03167 851 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 C1DQ13901 141 aaKnown RBP21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 TAB1Q15750 504 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 C1QTNF12Q5T7M4 302 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 TSPO2Q5TGU0 170 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 OR7E24Q6IFN5 339 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 C16orf89Q6UX73 402 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 WDR88Q6ZMY6 472 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 TSPYL5Q86VY4 417 aaPredicted RBP21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 FAM162AQ96A26 154 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 MUCL1Q96DR8 90 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 HS6ST2Q96MM7 605 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 PRSS27Q9BQR3 290 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 ARL8BQ9NVJ2 186 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 ST6GALNAC2Q9UJ37 374 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 RIMS3Q9UJD0 308 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 RPS6KA6Q9UK32 745 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 ADAM21Q9UKJ8 722 aa21.47■■□□□ 1.03
SDF2L1-201ENST00000248958 CSMD1Q96PZ7 3565 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 PDLIM1O00151 329 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 SIAH2O43255 324 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 CBLP22681 906 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 ST3GAL3Q11203 375 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 PMS2P3Q13401 168 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 IFI44LQ53G44 452 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 NIPAL3Q6P499 406 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 KDM8Q8N371 416 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 C1orf162Q8NEQ5 155 aaPredicted RBP21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 GEMIN6Q8WXD5 167 aaKnown RBP21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 PRRC1Q96M27 445 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 FKRPQ9H9S5 495 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 B3GAT1Q9P2W7 334 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 SEC14L4Q9UDX3 406 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 LRBAP50851 2863 aa21.46■■□□□ 1.03
SDF2L1-201ENST00000248958 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 OR5H1A6NKK0 313 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 MS4A18H0YCH9 400 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 KRT33AO76009 404 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 ZNF682O95780 498 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 SERPINA1P01009 418 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 IGF2P01344 180 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 IFNW1P05000 195 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 MPGP29372 298 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 CLDN17P56750 224 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 MXRA7P84157 204 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 IL1RL1Q01638 556 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 PIN1Q13526 163 aaPredicted RBP21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 STK11Q15831 433 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 ZNF74Q16587 644 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 MS4A18Q3C1V0 323 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 SPATS1Q496A3 300 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 GLYATQ6IB77 296 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 UEVLDQ8IX04 471 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 C17orf78Q8N4C9 275 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 FITM2Q8N6M3 262 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 OR5J2Q8NH18 312 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 MUS81Q96NY9 551 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 MOGAT1Q96PD6 335 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 LINC00470Q9BZP3 86 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 NANSQ9NR45 359 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 NOX1Q9Y5S8 564 aa21.45■■□□□ 1.02
SDF2L1-201ENST00000248958 RAD51DO75771 328 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 OR6A2O95222 327 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 ITGA5P08648 1049 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 HSD17B1P14061 328 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 DNASE1P24855 282 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 SELENOPP49908 381 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 PUDPQ08623 228 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 PPA1Q15181 289 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 SAMD4BQ5PRF9 694 aaKnown RBP21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 PAMR1Q6UXH9 720 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 FKBP9P1Q75LS8 142 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 AMBRA1Q9C0C7 1298 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 ESRP2Q9H6T0 727 aaKnown RBP21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 ZNF229Q9UJW7 825 aa21.44■■□□□ 1.02
SDF2L1-201ENST00000248958 HTR3EA5X5Y0 456 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 PLPP3O14495 311 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 SLC43A1O75387 559 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 MT-ND1P03886 318 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 PTNP21246 168 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 LOXP28300 417 aaPredicted RBP21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 GABRA6Q16445 453 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 PXKQ7Z7A4 578 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 VTCN1Q7Z7D3 282 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 TMEM239Q8WW34 195 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 NRGNQ92686 78 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 PLPPR2Q96GM1 343 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 EGFL7Q9UHF1 273 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 A4GNTQ9UNA3 340 aa21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 SAMD4AQ9UPU9 718 aaKnown RBP21.43■■□□□ 1.02
SDF2L1-201ENST00000248958 PDZD2O15018 2839 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 A0A1W2PPR1 153 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 ZNF587BE7ETH6 402 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 LRRN3E7EW58 273 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 ZNF432O94892 652 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 CH25HO95992 272 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 RAF1P04049 648 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 HIST1H2ABP04908 130 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms