RNA–Protein interactions for RNA: ENST00000246957.9

TRAP1-201, Transcript of TNF receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAP1, Length 2,296 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-201ENST00000246957 UNC119BA6NIH7 251 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 ZNF208O43345 1280 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 PPP1R3DO95685 299 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 ELK4P28324 431 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 RBM34P42696 430 aaKnown RBP11.69□□□□□ -0.54
TRAP1-201ENST00000246957 UQCRFS1P47985 274 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 SMIM11AP58511 58 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 ERVK-25P63136 954 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 SGCBQ16585 318 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 RPUSD3Q6P087 351 aaKnown RBP11.69□□□□□ -0.54
TRAP1-201ENST00000246957 ZNF620Q6ZNG0 422 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 SVOPLQ8N434 492 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 SDCCAG3Q96C92 435 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 FOXN4Q96NZ1 517 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 C9orf16Q9BUW7 83 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 UCK2Q9BZX2 261 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 POLR2J2Q9GZM3 115 aaKnown RBP11.69□□□□□ -0.54
TRAP1-201ENST00000246957 GABARAPL1Q9H0R8 117 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 FN3KQ9H479 309 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 ANKRD19PQ9H560 264 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 GPR52Q9Y2T5 361 aa11.69□□□□□ -0.54
TRAP1-201ENST00000246957 CLCA1A8K7I4 914 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 IGHV3-9P01782 118 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 LYNP07948 512 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 ARHGDIAP52565 204 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 TSPAN31Q12999 210 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 PMS2P3Q13401 168 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 MED21Q13503 144 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 GFRALQ6UXV0 394 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 TMPRSS11FQ6ZWK6 438 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 OR2V1Q8NHB1 315 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 CYGBQ8WWM9 190 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 HS6ST2Q96MM7 605 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 ZNF385AQ96PM9 386 aaKnown RBP11.68□□□□□ -0.54
TRAP1-201ENST00000246957 TRIB1Q96RU8 372 aa11.68□□□□□ -0.54
TRAP1-201ENST00000246957 MRPS18CQ9Y3D5 142 aaKnown RBP11.68□□□□□ -0.54
TRAP1-201ENST00000246957 PTP4A3O75365 173 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 C1QL1O75973 258 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 FPR3P25089 353 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 POU3F1Q03052 451 aaPredicted RBP11.67□□□□□ -0.54
TRAP1-201ENST00000246957 ZNF239Q16600 458 aaKnown RBP11.67□□□□□ -0.54
TRAP1-201ENST00000246957 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.67□□□□□ -0.542e-7■■□□□ 14
TRAP1-201ENST00000246957 RTL6Q6ICC9 239 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 SEM1Q6ZVN7 128 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 NANOGNBQ7Z5D8 188 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 CYB561A3Q8NBI2 242 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 GNPDA2Q8TDQ7 276 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 STK35Q8TDR2 534 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 RBM4BQ9BQ04 359 aaKnown RBP11.67□□□□□ -0.54
TRAP1-201ENST00000246957 KATNB1Q9BVA0 655 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 RBM4Q9BWF3 364 aaKnown RBP11.67□□□□□ -0.54
TRAP1-201ENST00000246957 C12orf10Q9HB07 376 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 ING1Q9UK53 422 aaPredicted RBP11.67□□□□□ -0.54
TRAP1-201ENST00000246957 CENPEQ02224 2701 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 FAM183AA6NL82 134 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 PLPP3O14495 311 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 RNF13O43567 381 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 CRYABP02511 175 aaKnown RBP11.67□□□□□ -0.54
TRAP1-201ENST00000246957 UQCRC1P31930 480 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 PTGS2P35354 604 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 PTGES3Q15185 160 aaKnown RBP11.67□□□□□ -0.54
TRAP1-201ENST00000246957 SOWAHCQ53LP3 525 aaPredicted RBP11.67□□□□□ -0.54
TRAP1-201ENST00000246957 CARD17Q5XLA6 110 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 ARHGAP11AQ6P4F7 1023 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 B3GLCTQ6Y288 498 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 ESPNLQ6ZVH7 1005 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 Q96M85 177 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 TSSK6Q9BXA6 273 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 DGCR6LQ9BY27 220 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 MED20Q9H944 212 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 QPCTLQ9NXS2 382 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 MGAT4BQ9UQ53 548 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 FAM215AQ9Y5M1 114 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 LRRK2Q5S007 2527 aa11.67□□□□□ -0.54
TRAP1-201ENST00000246957 UBR5O95071 2799 aaPredicted RBP11.66□□□□□ -0.54
TRAP1-201ENST00000246957 HELZ2Q9BYK8 2649 aaKnown RBP11.66□□□□□ -0.54
TRAP1-201ENST00000246957 AHCYL1O43865 530 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 ADAP00813 363 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 RPL4P36578 427 aaKnown RBP11.66□□□□□ -0.54
TRAP1-201ENST00000246957 RPS4XP62701 263 aaKnown RBP11.66□□□□□ -0.54
TRAP1-201ENST00000246957 FOXF2Q12947 444 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 NPRL3Q12980 569 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 ZBED5Q49AG3 693 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 RNF113BQ8IZP6 322 aaKnown RBP11.66□□□□□ -0.54
TRAP1-201ENST00000246957 C9orf106Q8NAJ2 232 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 NAXEQ8NCW5 288 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 OR5J2Q8NH18 312 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 MFSD8Q8NHS3 518 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 POP5Q969H6 163 aaKnown RBP11.66□□□□□ -0.54
TRAP1-201ENST00000246957 NRBF2Q96F24 287 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 TSSK2Q96PF2 358 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 TAPBPLQ9BX59 468 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 EVA1AQ9H8M9 152 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 ZNF556Q9HAH1 456 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 TBC1D23Q9NUY8 699 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 IER3IP1Q9Y5U9 82 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 AP4B1Q9Y6B7 739 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 TACC2O95359 2948 aa11.66□□□□□ -0.54
TRAP1-201ENST00000246957 GCN1Q92616 2671 aaKnown RBP11.66□□□□□ -0.54
TRAP1-201ENST00000246957 A0A1B0GVC2 190 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms