RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 TMEM72A0PK05 275 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 CLEC2LP0C7M8 214 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 CFL1P23528 166 aaKnown RBP21.09■□□□□ 0.97
MSX2-201ENST00000239243 NAA10P41227 235 aaPredicted RBP21.09■□□□□ 0.97
MSX2-201ENST00000239243 C1orf140Q5VVS0 124 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 ARL9Q6T311 187 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 DBX2Q6ZNG2 339 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 SNX29P2Q8IUI4 249 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 OR5J2Q8NH18 312 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 ZPLD1Q8TCW7 415 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 CCDC32Q9BV29 185 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 DEFB126Q9BYW3 111 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 RPRD1BQ9NQG5 326 aaKnown RBP21.09■□□□□ 0.97
MSX2-201ENST00000239243 ABCB10Q9NRK6 738 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 SIRT4Q9Y6E7 314 aaPredicted RBP21.09■□□□□ 0.97
MSX2-201ENST00000239243 CD8B2A6NJW9 211 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 TBX1O43435 398 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 AHSA1O95433 338 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 RENP00797 406 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 CD8BP10966 210 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 CDONQ4KMG0 1287 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 DDI2Q5TDH0 399 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 TMEM91Q6ZNR0 172 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 PLEKHG7Q6ZR37 379 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 SNX33Q8WV41 574 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 ATOH1Q92858 354 aaPredicted RBP21.09■□□□□ 0.97
MSX2-201ENST00000239243 PPP1R14BQ96C90 147 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 LOXL4Q96JB6 756 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 TSPAN32Q96QS1 320 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 ALG12Q9BV10 488 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 PTDSS2Q9BVG9 487 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 ULBP3Q9BZM4 244 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 AKIRIN1Q9H9L7 192 aaPredicted RBP21.09■□□□□ 0.97
MSX2-201ENST00000239243 SDHAF3Q9NRP4 125 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 VCANP13611 3396 aa21.09■□□□□ 0.97
MSX2-201ENST00000239243 FLRT2O43155 660 aa21.08■□□□□ 0.97
MSX2-201ENST00000239243 CCL4P13236 92 aa21.08■□□□□ 0.97
MSX2-201ENST00000239243 MSX1P28360 303 aa21.08■□□□□ 0.97
MSX2-201ENST00000239243 CCKBRP32239 447 aa21.08■□□□□ 0.97
MSX2-201ENST00000239243 PYCR1P32322 319 aa21.08■□□□□ 0.97
MSX2-201ENST00000239243 GBX2P52951 348 aaPredicted RBP21.08■□□□□ 0.97
MSX2-201ENST00000239243 LYSMD2Q8IV50 215 aa21.08■□□□□ 0.97
MSX2-201ENST00000239243 GHDCQ8N2G8 530 aa21.08■□□□□ 0.97
MSX2-201ENST00000239243 MS4A15Q8N5U1 240 aa21.08■□□□□ 0.97
MSX2-201ENST00000239243 OR2T4Q8NH00 348 aa21.08■□□□□ 0.97
MSX2-201ENST00000239243 OR6S1Q8NH40 331 aa21.08■□□□□ 0.97
MSX2-201ENST00000239243 SMOC1Q9H4F8 434 aa21.08■□□□□ 0.97
MSX2-201ENST00000239243 GDF9O60383 454 aa21.08■□□□□ 0.96
MSX2-201ENST00000239243 LINC01590Q5TEZ4 76 aa21.08■□□□□ 0.96
MSX2-201ENST00000239243 SSX6Q7RTT6 188 aa21.08■□□□□ 0.96
MSX2-201ENST00000239243 EXD3Q8N9H8 876 aa21.08■□□□□ 0.96
MSX2-201ENST00000239243 SMAP2Q8WU79 429 aaPredicted RBP21.08■□□□□ 0.96
MSX2-201ENST00000239243 SLC25A36Q96CQ1 311 aa21.08■□□□□ 0.96
MSX2-201ENST00000239243 DCLRE1CQ96SD1 692 aaKnown RBP21.08■□□□□ 0.96
MSX2-201ENST00000239243 ARRDC1-AS1Q9H2J1 176 aa21.08■□□□□ 0.96
MSX2-201ENST00000239243 KLRF1Q9NZS2 232 aa21.08■□□□□ 0.96
MSX2-201ENST00000239243 PCDHGA5Q9Y5G8 931 aa21.08■□□□□ 0.96
MSX2-201ENST00000239243 B4E171 279 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 PRKCAP17252 672 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 APOBEC1P41238 236 aaKnown RBP21.07■□□□□ 0.96
MSX2-201ENST00000239243 TSPAN7P41732 249 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 MTNR1BP49286 362 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 DLX5P56178 289 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 FAM69BQ5VUD6 431 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 DMKNQ6E0U4 476 aaPredicted RBP21.07■□□□□ 0.96
MSX2-201ENST00000239243 FAM198BQ6UWH4 519 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 RHBDD1Q8TEB9 315 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 CMKLR1Q99788 373 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 INIPQ9NRY2 104 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 SLC39A1Q9NY26 324 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 TAS2R5Q9NYW4 299 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 TRAPPC4Q9Y296 219 aa21.07■□□□□ 0.96
MSX2-201ENST00000239243 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 E9PI62 339 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 TRIM3O75382 744 aaPredicted RBP21.06■□□□□ 0.96
MSX2-201ENST00000239243 FBXO45P0C2W1 286 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 MESTQ5EB52 335 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 C1QL3Q5VWW1 255 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 FAM199XQ6PEV8 388 aaPredicted RBP21.06■□□□□ 0.96
MSX2-201ENST00000239243 ELP5Q8TE02 316 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 ZNRF4Q8WWF5 429 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 ASB15Q8WXK1 588 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 ZNF346Q9UL40 294 aaKnown RBP21.06■□□□□ 0.96
MSX2-201ENST00000239243 SELENOFO60613 162 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 OR2J2O76002 312 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 OR6A2O95222 327 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 SERPINA3P01011 423 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 TGM1P22735 817 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 TGM4P49221 684 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 MAP2K6P52564 334 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 MFSD13AQ14CX5 517 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 PCOLCEQ15113 449 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 BTBD16Q32M84 506 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 EGFL6Q8IUX8 553 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 LAX1Q8IWV1 398 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 THAP4Q8WY91 577 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 PPP4R1LQ9P1A2 415 aa21.06■□□□□ 0.96
MSX2-201ENST00000239243 PTRH2Q9Y3E5 179 aaKnown RBP21.06■□□□□ 0.96
MSX2-201ENST00000239243 XKRYO14609 159 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 HCCSP53701 268 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms