RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 KATNB1Q9BVA0 655 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 RBM24Q9BX46 236 aaKnown RBP10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 C12orf49Q9H741 205 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 A0A0J9YW62 118 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 K7EM74 188 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 SYT14Q8NB59 555 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 RDH12Q96NR8 316 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 KCNS3Q9BQ31 491 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 TOR3AQ9H497 397 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 RNF121Q9H920 327 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 AQP7O14520 342 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 BCL2A1Q16548 175 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 LCN1P1Q5VSP4 162 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 C1QL3Q5VWW1 255 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 CCDC103Q8IW40 242 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF786Q8N393 782 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 FNDC9Q8TBE3 224 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 APH1AQ96BI3 265 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 TIMP4Q99727 224 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 WFDC6Q9BQY6 131 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 ADI1Q9BV57 179 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 TLX2O43763 284 aaPredicted RBP10□□□□□ -0.81
TNFAIP3-201ENST00000237289 MITFO75030 526 aaPredicted RBP10□□□□□ -0.81
TNFAIP3-201ENST00000237289 CD14P08571 375 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 GAS1P54826 345 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 BIDP55957 195 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 FOXO1Q12778 655 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF566Q969W8 418 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 MIB2Q96AX9 1013 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 ENKD1Q9H0I2 346 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 SRA1Q9HD15 236 aaKnown RBP10□□□□□ -0.81
TNFAIP3-201ENST00000237289 KLHL21Q9UJP4 597 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 BPTFQ12830 3046 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 CLCA1A8K7I4 914 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 DVL2O14641 736 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 FAM20BO75063 409 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 CAMK2DQ13557 499 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 TMEM44Q2T9K0 475 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 LEG1Q6P5S2 330 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 EGLN3Q9H6Z9 239 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 PROCRQ9UNN8 238 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 LOC100130705A0A1B0GUX0 176 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 A0A1W2PPL8 197 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 H3BNX3 289 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 FFAR1O14842 300 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 CASQ2O14958 399 aaPredicted RBP10□□□□□ -0.81
TNFAIP3-201ENST00000237289 SLC19A2O60779 497 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 PMS2P2O95744 297 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 FOXK1P85037 733 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 SEC23BQ15437 767 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 SGCAQ16586 387 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 C1orf94Q6P1W5 598 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 MTFR2Q6P444 385 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 DPY19L2P2Q6ZN68 376 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 STX19Q8N4C7 294 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 LRRC17Q8N6Y2 441 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 TCEANCQ8N8B7 351 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 OR2AJ1Q8NGZ0 328 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 ULBP2Q9BZM5 246 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 ANKRD11Q6UB99 2663 aaPredicted RBP10□□□□□ -0.81
TNFAIP3-201ENST00000237289 LIPT2A6NK58 231 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 CCL21O00585 134 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 DNPH1O43598 174 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 EDN3P14138 238 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 IFNGR1P15260 489 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 CAPGP40121 348 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 RPL18Q07020 188 aaKnown RBP10□□□□□ -0.81
TNFAIP3-201ENST00000237289 CMPK2Q5EBM0 449 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 FAM205BPQ63HN1 556 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 GCNT2Q8N0V5 402 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 IQCF1Q8N6M8 205 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF845Q96IR2 970 aaPredicted RBP10□□□□□ -0.81
TNFAIP3-201ENST00000237289 NIPSNAP1Q9BPW8 284 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 DGCR6LQ9BY27 220 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 C20orf141Q9NUB4 165 aa10□□□□□ -0.81
TNFAIP3-201ENST00000237289 ACADSP16219 412 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 HMGA2P52926 109 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 CRYBA2P53672 197 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 KRR1Q13601 381 aaKnown RBP9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 MELKQ14680 651 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 VASNQ6EMK4 673 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 COMTD1Q86VU5 262 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 LSM14AQ8ND56 463 aaKnown RBP9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 NSMAFQ92636 917 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 RND1Q92730 232 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 GALNT8Q9NY28 637 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 MRPL39Q9NYK5 338 aaKnown RBP9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 GTF2A1LQ9UNN4 478 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 LIPGQ9Y5X9 500 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 C7orf72A4D263 438 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 SNAP29O95721 258 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 UBE2NP61088 152 aaKnown RBP9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 EIF2S3LQ2VIR3 472 aaKnown RBP9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 LINC00303Q3SY05 128 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 C1orf185Q5T7R7 199 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 TMPRSS11FQ6ZWK6 438 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 WBP1Q96G27 269 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 SH2D2AQ9NP31 389 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 GLRX2Q9NS18 164 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms