RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SIGLEC1Q9BZZ2 1709 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 C7orf77A4D0Y5 90 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 HSBP1L1C9JCN9 74 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 HOXA2O43364 376 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 CD37P11049 281 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 CDX1P47902 265 aaPredicted RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 SHC2P98077 582 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 C12orf73Q69YU5 71 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 MDGA2Q7Z553 956 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 OR13C9Q8NGT0 318 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 SMOQ99835 787 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 C5P01031 1676 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 PLSCR5A0PG75 271 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 TMEM88BA6NKF7 163 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 ZNF823P16415 610 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 NFATC2Q13469 925 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 RPUSD3Q6P087 351 aaKnown RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 OR6N2Q8NGY6 317 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 RHBGQ9H310 441 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 NOX4Q9NPH5 578 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 CREBZFQ9NS37 354 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 TINAGQ9UJW2 476 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 ING1Q9UK53 422 aaPredicted RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 MMP24Q9Y5R2 645 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 NPIPB9F8W1W9 429 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 F3P13726 295 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 ACRV1P26436 265 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 HBA1P69905 142 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 SLC35D2Q76EJ3 337 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 COX15Q7KZN9 410 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 ZNF280BQ86YH2 543 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 APOBEC3FQ8IUX4 373 aaKnown RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 SGPP2Q8IWX5 399 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 C2orf73Q8N5S3 287 aaPredicted RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 ZMYND19Q96E35 227 aaPredicted RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 TRMT61BQ9BVS5 477 aaKnown RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 KLK11Q9UBX7 282 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 MEGF11A6BM72 1044 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 OR6C6A6NF89 314 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 MFNGO00587 321 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 TOX4O94842 621 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 F12P00748 615 aaPredicted RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 ATP1B2P14415 290 aaPredicted RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 SLC6A11P48066 632 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 P2RX1P51575 399 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 SLC9A3R2Q15599 337 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 SLC25A35Q3KQZ1 300 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 LCN10Q6JVE6 187 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 MRPL10Q7Z7H8 261 aaKnown RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 ARHGAP12Q8IWW6 846 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 MUC20Q8N307 709 aaPredicted RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 SCAMP5Q8TAC9 235 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 SFXN5Q8TD22 340 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 TVP23CQ96ET8 276 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 WRAP53Q9BUR4 548 aaKnown RBP11.95□□□□□ -0.5
VAMP4-201ENST00000236192 PPT2Q9UMR5 302 aa11.95□□□□□ -0.5
VAMP4-201ENST00000236192 M0QYG6 137 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 SOCS6O14544 535 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 SIAH2O43255 324 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 TMEM127O75204 238 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 GRPRP30550 384 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 MVDP53602 400 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 REEP5Q00765 189 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 ZNF426Q9BUY5 554 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 HCAR1Q9BXC0 346 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 DPH1Q9BZG8 443 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 PLEKHM1Q9Y4G2 1056 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 GLTPD2A6NH11 291 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 CDKN1CP49918 316 aaPredicted RBP11.94□□□□□ -0.5
VAMP4-201ENST00000236192 ELAVL1Q15717 326 aaKnown RBP11.94□□□□□ -0.5
VAMP4-201ENST00000236192 OR52D1Q9H346 318 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 CTDSPLO15194 276 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 HOXB5P09067 269 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 MMP11P24347 488 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 CLDN6P56747 220 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 RPL23AP62750 156 aaKnown RBP11.94□□□□□ -0.5
VAMP4-201ENST00000236192 GMLQ99445 158 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 MCOLN1Q9GZU1 580 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 PCBD2Q9H0N5 130 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 OSER1Q9NX31 292 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 FBXO10Q9UK96 956 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 FCF1Q9Y324 198 aaKnown RBP11.94□□□□□ -0.5
VAMP4-201ENST00000236192 RREB1Q92766 1687 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 TRAV1-2A0A0B4J238 106 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 OR6C76A6NM76 312 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 RTCAO00442 366 aaKnown RBP11.94□□□□□ -0.5
VAMP4-201ENST00000236192 CTSLP07711 333 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 GALTP07902 379 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 KCNE1P15382 129 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 DACT2Q5SW24 774 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 ACSM5Q6NUN0 579 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 MISPQ8IVT2 679 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 MCEMP1Q8IX19 187 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 OR13C5Q8NGS8 318 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 UBTD2Q8WUN7 234 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 GPR173Q9NS66 373 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 STEAP1Q9UHE8 339 aa11.94□□□□□ -0.5
VAMP4-201ENST00000236192 KLF8O95600 359 aaPredicted RBP11.93□□□□□ -0.5
VAMP4-201ENST00000236192 PPP1R3DO95685 299 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 S1PR1P21453 382 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms