RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CD300AQ9UGN4 299 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 RASD1Q9Y272 281 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 GPR52Q9Y2T5 361 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 LRBAP50851 2863 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 A0A1W2PPR1 153 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 MS4A18H0YCH9 400 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 VAMP5O95183 116 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 OR5F1O95221 314 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 HPRP00739 348 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 HRGP04196 525 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 T-ENOLP0DO92 83 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 HLA-DOBP13765 273 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 HSD17B1P14061 328 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 NQO1P15559 274 aaKnown RBP11.19□□□□□ -0.62
LSM5-201ENST00000223084 CRYGSP22914 178 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 IL32P24001 234 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 SELENOPP49908 381 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 UGT2B15P54855 530 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 CLDN17P56750 224 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 RIPPLY3P57055 190 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 FAPQ12884 760 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 PMS2P3Q13401 168 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 P2RY6Q15077 328 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 MS4A18Q3C1V0 323 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 IFI44LQ53G44 452 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 TSPO2Q5TGU0 170 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 C9orf135Q5VTT2 229 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 RINLQ6ZS11 566 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 BHLHA15Q7RTS1 189 aaPredicted RBP11.19□□□□□ -0.62
LSM5-201ENST00000223084 CDC20BQ86Y33 519 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 WFDC8Q8IUA0 241 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 LRRC17Q8N6Y2 441 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 ZNF433Q8N7K0 673 aaPredicted RBP11.19□□□□□ -0.62
LSM5-201ENST00000223084 FAM86B1Q8N7N1 296 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 STEAP2Q8NFT2 490 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 OR6S1Q8NH40 331 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 PFN4Q8NHR9 129 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 GEMIN6Q8WXD5 167 aaKnown RBP11.19□□□□□ -0.62
LSM5-201ENST00000223084 TMEM45BQ96B21 275 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 MPP4Q96JB8 637 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 ZNF426Q9BUY5 554 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 ASPNQ9BXN1 380 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 HDHD5Q9BXW7 423 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 LIME1Q9H400 295 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 MEPEQ9NQ76 525 aaPredicted RBP11.19□□□□□ -0.62
LSM5-201ENST00000223084 SLC7A10Q9NS82 523 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 PARPBPQ9NWS1 579 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 ZNF226Q9NYT6 803 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 A4GNTQ9UNA3 340 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 B3GALT5Q9Y2C3 310 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 V9GYQ6 96 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 CADP27708 2225 aa11.19□□□□□ -0.62
LSM5-201ENST00000223084 HRNRQ86YZ3 2850 aaPredicted RBP11.18□□□□□ -0.62
LSM5-201ENST00000223084 DEFB108AA8MXU0 73 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 FFAR1O14842 300 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 CNOT4O95628 575 aaKnown RBP11.18□□□□□ -0.62
LSM5-201ENST00000223084 IFNW1P05000 195 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 ITGA5P08648 1049 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 PPP3CBP16298 524 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 ZNF43P17038 809 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 COX5AP20674 150 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 DNAJA1P31689 397 aaKnown RBP11.18□□□□□ -0.62
LSM5-201ENST00000223084 MNAT1P51948 309 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 LSM11P83369 360 aaKnown RBP eCLIP11.18□□□□□ -0.62
LSM5-201ENST00000223084 C1DQ13901 141 aaKnown RBP11.18□□□□□ -0.62
LSM5-201ENST00000223084 MFSD13AQ14CX5 517 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 STK11Q15831 433 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 ZNF74Q16587 644 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 SAMD4BQ5PRF9 694 aaKnown RBP11.18□□□□□ -0.62
LSM5-201ENST00000223084 NIPAL3Q6P499 406 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 TSEN54Q7Z6J9 526 aaKnown RBP11.18□□□□□ -0.62
LSM5-201ENST00000223084 PIK3IP1Q96FE7 263 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 PRRC1Q96M27 445 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 POLR2J2Q9GZM3 115 aaKnown RBP11.18□□□□□ -0.62
LSM5-201ENST00000223084 POLR2J3Q9H1A7 115 aaKnown RBP11.18□□□□□ -0.62
LSM5-201ENST00000223084 SLCO5A1Q9H2Y9 848 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 OCEL1Q9H607 264 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 C20orf141Q9NUB4 165 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 DCAF13Q9NV06 445 aaKnown RBP11.18□□□□□ -0.62
LSM5-201ENST00000223084 ASB6Q9NWX5 421 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 NDE1Q9NXR1 346 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 UPB1Q9UBR1 384 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 MALT1Q9UDY8 824 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 RPS6KA6Q9UK32 745 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 CORINQ9Y5Q5 1042 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 PDZD2O15018 2839 aa11.18□□□□□ -0.62
LSM5-201ENST00000223084 CIB4A0PJX0 185 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 C11orf98E9PRG8 122 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 PLPP3O14495 311 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 ARPC2O15144 300 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 KLF4O43474 513 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 TRAF3IP2O43734 574 aaPredicted RBP11.17□□□□□ -0.62
LSM5-201ENST00000223084 PIP5K1CO60331 668 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 GMNNO75496 209 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 UPK3AO75631 287 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 RAD51DO75771 328 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 SERPINI2O75830 405 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 MT-ATP6P00846 226 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 UMPSP11172 480 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 AHCYP23526 432 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms